Gossypium hirsutum (upland cotton): 107954699
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Entry
107954699 CDS
T04793
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107954699
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107954699
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107954699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_11
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
Prok-RING_4
FANCL_C
zf_RING_Vps8_fungal
zf-RING_Vps41
PHD_NSD
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107954699
NCBI-ProteinID:
XP_016745822
UniProt:
A0A1U8P699
LinkDB
All DBs
Position
D07:34628833..34630621
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AA seq
162 aa
AA seq
DB search
MGLSSLPAPSEGVLCVLLVNTALSISMVKGIIRSILHVVGIHLSSSSSSSSSSSSSSPPS
SDLIEIPAVSFDISIGNADSYIKEFRSRMPSTRYDAVCSGSQPEHDCSVCLTRFEPESEI
NRLSCGHLFHKVCLEKWLNYWNVTCPLCRNALLPEDDPAYFW
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcaagtctcccagccccatcagaaggagtgctatgtgtactcttggtaaac
acagctttatccatatctatggttaaaggcataattcgatcaatccttcacgttgtcggt
atccatctctcctcctcctcgtcctcctcctcctcgtcatcatcatcatcaccgccatcc
tcggatcttattgaaatccctgcggtatcattcgacatcagcatcggtaatgctgatagt
tacattaaagagttccggagcaggatgccatcgacccggtacgatgcggtatgtagcggc
agtcaaccggagcatgactgttcagtttgcctgactaggttcgaaccagaatcagagatt
aaccgcttgtcctgcggtcatctgtttcacaaggtatgcttggaaaagtggttgaactat
tggaatgtcacatgccctctttgcaggaacgctctgctgcccgaagatgatccggcctac
ttttggtga
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