Gossypium hirsutum (upland cotton): 107954856
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Entry
107954856 CDS
T04793
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107954856
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107954856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Aladin
Cytochrom_D1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
107954856
NCBI-ProteinID:
XP_016746031
UniProt:
A0A1U8P481
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Position
D07:49492455..49496966
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AA seq
522 aa
AA seq
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MGAKKENNDDEMDEKVKKYLRGEAANLEGLKDKKLKGQLAVREDLYGKSAKTAAKIEKWL
LPSEGGYLEAEGIEKTWRIKQESIAREIDISSSKNQYDIVLPELGPYTLDFTSNGRYMAA
AGRKGHLAIVDMKTLNLIKEIQVKETVRDVVYLHNELFFAVAQKKYPYIYNRDGTELHCL
KEHGAVLRLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNFRTGLGRTDVMQVNPFNGVV
ALGHSSGTVTMWKPTSSVPLVKMLCHPGPVSSLAFHPNGHLMATSGKENKIKIWDLRKFE
VIQTMLGHAKTLNFSQKGLLAAGTGSFIKVLADFSGSQNYNSYMTHSMAKGYQVGKVLFR
PYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETVML
DPTKVGTVRAPQKKEKPTKKEIEAEMDAAIETAKDTDFKKKTKGRNKPSKRAKKRQEMIE
RAKKPLLEQQIQEHETSRKKQKTNPEIEMPKSLQRFVRQKAT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctaaaaaggagaataacgatgatgagatggacgaaaaagtgaagaagtatctt
agaggagaagctgcaaatttggagggattaaaggacaagaaactaaagggccagcttgct
gtaagagaagatttgtatggaaaatctgcgaaaactgctgccaagattgagaaatggctt
ttgcccagtgagggtggttacttggaggcagagggtattgagaagacatggaggatcaaa
caagaatccattgctcgtgagattgatatctcaagctcaaagaaccagtatgatattgtt
ttaccagaacttggtccttacactctagatttcacctcaaatggtcggtatatggcagcc
gctggacgtaagggccatctggctattgttgatatgaagacattaaacctaattaaggag
attcaggttaaagaaacagtacgggatgtagtgtacttgcataatgaactcttttttgct
gttgctcagaaaaagtacccttatatttataatcgtgatggaactgagctccattgttta
aaggaacacggtgcagtactaagactccagtttctgaaaaaccacttcctcttggcatca
ataaacaaatttgggcagcttcattatcaggatgttacaatgggtgagatggtaggcaat
ttccggactggtttaggccgcactgatgttatgcaggtcaatccatttaacggagttgtt
gcattgggtcattctagtggtacagtaaccatgtggaagcccaccagttctgtcccactt
gtaaagatgctatgccatcctggacctgtctcatcactggcgttccatccaaatggccat
ctcatggctacatctgggaaagaaaataaaatcaagatttgggacttgaggaagtttgag
gttattcaaacaatgctaggtcacgcaaagaccttgaatttcagtcagaaaggcttgctt
gctgccggaactggatcatttataaaagttttagctgatttttctggatctcagaattat
aatagttatatgactcattctatggctaaaggttaccaggtagggaaagttttgtttcga
ccatatgaagatgttttggggataggacactccatgggttggtctagtattcttattcca
ggatctggggaacccaactttgattcttgggtggcaaacccattcgaaacatctaaacag
aggcgagagaaggaagtgcactctctgcttgacaagcttccacccgaaacagtaatgttg
gatccaaccaaggttggtacagtgagagcaccacaaaagaaagagaagccaacaaagaag
gagatagaagctgaaatggatgctgccattgaaactgcaaaggataccgactttaaaaag
aaaacaaagggaaggaacaagccgagtaagagagcaaagaagagacaagagatgattgaa
agagccaagaaaccactcttggaacaacaaatacaggaacatgaaacgtctagaaagaag
cagaaaaccaatccggaaattgaaatgccgaaaagtttacagcggtttgttcgtcagaaa
gcaacttaa
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