Gossypium hirsutum (upland cotton): 107955028
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Entry
107955028 CDS
T04793
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X2
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107955028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107955028
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107955028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107955028
NCBI-ProteinID:
XP_016746219
UniProt:
A0A1U8P524
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Position
D07:51806354..51809609
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AA seq
476 aa
AA seq
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MSENGKLFIGGISWETNEERLKEYFSSFGEVVEAMIMKDWTTGRARGFGFIVFSDLAVAE
KVIKEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSIQGSPSLCRIRKIFVGGLASTVTDSD
FKKYFDHFGNITDVVVMYDHNTQRPRGFGFVTYDSEEAVDKVLLKSFHELNGKMVEVKRA
VPKELLPGPCRSPLVGYNYGLNRVNNFLSGCTQGYTPSNIGGFGLRIDGRFSRVPGGRSG
FPPCGSGYGMGMNFEPGLNPSFGNSANFSSNMNYGRGLNPYYIGNANRFGSPIGYDGSTG
GNTSFFSSVTRNLWGNGGLNYNTNGSSSNAYIGSGSVSIGGSASGNSGINWSSAIANQDE
GSNVSNNSVHFAYGSADDSFRLGIVGYGRNNGTNVAPKSSYATSNFGYDVAFTDLYGGAS
AYGDITWRSSTFKRDGSGSFGYGLGSATSDVSGKNSPGYVSSHKVNKRQASRGNTS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatggtaagctatttattggtgggatatcttgggaaaccaatgaagagcgt
cttaaggagtatttcagtagttttggtgaagtggtagaggcgatgatcatgaaggattgg
accacaggacgtgctcgaggtttcggtttcattgttttctctgacctagcagttgctgag
aaagtcatcaaggagaaacataatattgatgggagaatggttgaggcaaaaaaggcagtt
cctagggatgaccagaacattatgagtagaagcactagtagcatccaaggttcacctagt
ctatgccgcataagaaagatttttgttggaggtttagcatcaacagtcacagatagtgac
tttaagaagtattttgatcattttgggaatatcacagatgttgtagtgatgtatgatcac
aacactcaaaggcctaggggtttcggattcgttacttatgattcagaagaggcagtggac
aaagtgttgctaaaaagtttccatgaacttaatggtaaaatggtcgaggttaaacgagca
gtacctaaagaattattgcctggcccttgtcgtagtcccctcgttggatataactatggt
ctgaatagggttaacaactttcttagtggctgcactcagggatatactccaagcaatatt
ggaggctttggacttaggatagatggtagatttagtagagttcctggtggtcgaagtggt
tttcctccttgtggttctggttatggaatgggcatgaactttgagcctgggttaaaccca
agttttggaaatagtgcaaattttagtagtaatatgaactatggacggggattgaatcct
tactatattggtaatgcaaatagatttggtagccctattgggtatgatggaagtactgga
ggtaatacttccttttttagctcagtgactcgaaacctttggggaaatgggggactcaat
tataacacaaatggttccagttccaatgcatatataggatctggaagtgttagtatagga
ggaagcgcctctggaaatagtggaattaattggagttctgcaattgccaatcaagacgag
gggagtaatgtttctaacaatagtgtgcatttcgcttatggaagtgctgatgacagcttt
aggttagggatagtagggtatgggagaaataatgggaccaatgtggcgccaaaatcatca
tatgcaacatcaaattttggttatgatgtagcctttacagacctttatggtggtgcttca
gcttatggggatataacttggcgatcatcaacatttaagcgagatggttctggttccttt
ggctatggacttggtagtgccacttctgatgtttcaggcaaaaattctcccggctatgtt
agtagtcataaagttaataagagacaagcaagtagaggtaatacttcctag
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