Gossypium hirsutum (upland cotton): 107955077
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Entry
107955077 CDS
T04793
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107955077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107955077
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107955077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
CFA69_ARM_rpt
Leptin
Motif
Other DBs
NCBI-GeneID:
107955077
NCBI-ProteinID:
XP_040952807
UniProt:
A0ABM3ADB0
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All DBs
Position
D07:50239895..50242478
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AA seq
246 aa
AA seq
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IQIITSAYRALSSDGLTEKALTQVCNAIALFQSVASHPDTRIPFIRATMPVYLYPFLNTM
SNERSYECLRITSLGVIGSLAKVEDAEVIEYLLSTQIFPSCLRCMEVGKTLSRTVSTFII
YRILLSEKGLKYCFVLAERYLSVSQCLGKLVENLSEDDAENLPCLLRNIIGCYLRLSENE
RTRPQLSSYVPWKLLDGKYANIVRSDPKALANLRQLVCNLRTSKSCTTHCTDEPPTSSNS
PGPSIP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
attcagataataacttcagcttaccgtgcactgtcatccgacggccttactgaaaaagct
ctaacacaagtctgcaatgcaatagcccttttccagtctgtagcttctcaccctgataca
aggattccatttatcagagctacaatgccagtgtatctgtatcccttcttgaacaccatg
agcaatgaaaggagctacgaatgtctaaggattaccagcttaggtgtgatcgggtcccta
gcaaaggtagaggatgcagaagtgatagagtacctgctttcaactcaaatatttcccagt
tgcctacgctgcatggaggttggcaaaacattgtcaagaacagtgtccacatttataatt
tacagaatcttactaagtgagaaagggctcaagtactgtttcgttcttgctgaacgatat
ctctcagtatcccaatgtttggggaaattggttgaaaaccttagtgaagatgatgcagaa
aatttgccttgcctcctcagaaatatcatcggatgttacctcaggctctccgaaaacgaa
aggacaaggccacaattgtcgagctacgttccatggaagttgttagatggcaaatatgct
aacatcgttcggagtgatccaaaggctcttgctaacctacgacaattggtttgcaattta
aggaccagcaagagttgtacaacccactgtaccgacgagccaccgactagcagcaactca
cccgggccgtccattccatga
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