Gossypium hirsutum (upland cotton): 107955174
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Entry
107955174 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107955174 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107955174
Membrane trafficking [BR:
ghi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107955174
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
107955174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
ANAPC4_WD40
Synaptobrevin
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_IFT140_1st
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
107955174
NCBI-ProteinID:
XP_016746390
UniProt:
A0A1U8P5K8
LinkDB
All DBs
Position
D04:complement(13492027..13500537)
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AA seq
965 aa
AA seq
DB search
MYLGDEHGMVYVLKYDADQRKLTNLPYYVPTNVIAEEAGISSPNHPSVVGVLPQPCSQGN
RVLIAYVNGLIVIWDVSDDKVVLVRGNKDLQLQGETASGSPENKNLEVSDCVSESDKVEK
EISSLCWASNDGSILAVGYVDGDIMFWALPTATSKNNQQASKSHKNVVKLQLSSGEKRLP
VIVLHWSENQSHSARGCKIFFYGGDQIGSKETLTILDLECPSGIESLKCVSHVDITPNGS
FADMVLFPTVGEMENGGSLLFVLTNPGQLLVYDDACLAAFNSQDEKKPCVSSGQYVMPIP
IVAPCMTVSKLSLVDRDGEFSKALTKIVSTAKLKAPHTPIRSSKKWPLTGGIPSRLPEAA
DYEVERVYMAGYQDGSVRMWDATYPALSLIFVLGAEIYGKVPGIDIAGASAPVSALEICS
FTQSVAIGNECGMVCLFKLTGTSNEMSLNIVTETEKKVHTLHQADGLQCMALFSLFSSPV
CLLQSTEFGNRLAVGLKCGRVAVLDVGTSSVLFITDSLSRSNCSVSSLAMISFTDTNTLI
NNSKDSTSTNLNDGEKGLVFIMTRDAYLAVLDGRTGHMVSSQSIPQKKESSAISMYILEG
GNIVSSTVISESKNEPAHSSTDPEIAPVEPKSETAAQVAYLGQRSKSLLILLCFEDALHL
HSLKSVIKGTCDSIREVNLKQCCWTSAIKIDDKECGLVLLCRTGIIEIRSLTKLEVMGQS
SLMTILRWNFTANMEKMACSSNRGQIVLINGCEFAAVSILALENDFRIPDSLPCFHDTVL
AAAFDATVKSEDTSHGILGGIFKGLIGGKQDRNMQIKEACRNDFPQLESIFSSPPFLKPS
TASTDDKEVINLNIDDILIDEKITVFPKSETINNDEKNKRERLFEGSSTDAKPTVRSVYE
IRAKYRGPEDAAAAAARARDRLIERQEKLERINDRSQELQNEAENFASIAHQLARKMEKK
KWWNI
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttggagatgagcacggaatggtgtatgttttaaagtatgatgctgaccaacgc
aagcttaccaacctgccctattatgttcccacaaatgttatagctgaagaggctggaatt
tcatcaccaaatcatccttctgttgttggagttctcccccaaccttgttctcagggaaat
agagtactgattgcttacgtgaatgggttgattgtcatctgggatgtttctgatgataaa
gttgttctagttagaggcaataaggatcttcaattgcaaggtgaaacagcatctggttcc
ccagaaaataaaaaccttgaggtttctgattgtgtatcagaaagtgataaagtggagaaa
gagataagctctctttgttgggcatctaatgacgggtcaattctcgcagttggttatgta
gatggggatatcatgttttgggccctaccaactgctacctctaaaaataatcagcaagct
tcaaaatctcacaaaaatgttgttaaactacaattatcatcaggagagaaacgacttcca
gtcattgttttacattggtctgaaaaccaatcccatagtgctcgtggttgcaagattttt
ttttatggaggtgatcaaattggatctaaagaaactctgacgatcttggaccttgaatgc
ccttctggaatagaaagtctaaaatgtgtcagccacgtggacattacacctaatggctct
tttgcggatatggttttatttccaactgttggagagatggagaatggtggcagtttgtta
tttgtgttgacaaatccagggcaattgcttgtttatgatgatgcatgcttggctgccttc
aattcccaggatgagaaaaagccttgtgtttcttcaggacagtatgttatgccaataccc
attgttgctccatgcatgactgtgagtaagcttagtttagttgacagagatggggaattt
tcgaaggctcttaccaagatagtatcaactgcaaagcttaaagcaccacatactccaatt
agatcgagtaaaaagtggcctttgactggtggtattcctagccgtcttcctgaagctgca
gattatgaagttgaaagagtatatatggcaggttaccaggatggatctgttcgaatgtgg
gatgctacctaccctgctctttcacttatctttgttttaggagctgagatatatggaaag
gttccaggcattgatattgctggtgcaagtgcaccagtttcagcattggaaatttgctcc
ttcactcaaagtgtagccattggcaatgaatgtggtatggtttgtctattcaagctaact
ggaacttccaatgaaatgagtttgaacattgtgacagaaacggagaaaaaagtccatacc
ttgcatcaagcagatggtcttcaatgcatggccttgttctcgctcttcagttctcctgtc
tgtttgcttcaatctacagaatttggtaatagactagcagtaggacttaagtgtggccgg
gttgcagtgcttgatgttggtacatcttcagtgttgttcattacagatagtttgtcacgc
tcaaactgctctgtcagttctttggctatgatatcctttacagataccaataccttaata
aacaactcaaaggattctacatccacgaatctgaatgatggcgaaaaggggttggtgttc
ataatgaccagggacgcttacctagctgttttagatggcagaactggccatatggttagc
tctcagtcaatacctcagaaaaaggagtcgagtgccatctccatgtacattttagagggt
ggcaatatagtttcgtcaacagtgatcagtgaatctaaaaatgaacctgcacattctagt
actgaccctgaaattgctccagtggaacctaaatctgagactgctgctcaagtggcatat
cttgggcagagatcaaaaagtttactcatcttactttgttttgaggatgcactgcattta
cattctttgaagtcagttattaaggggacctgtgactccatccgggaagtgaatcttaaa
caatgttgttggacttcagccatcaagatagatgacaaagagtgtggattggttctgctt
tgcaggactggaatcattgaaataaggtctttgacaaagcttgaagtgatgggacaatct
tctttgatgactattcttagatggaacttcacagcaaacatggaaaagatggcatgttct
tcaaatagagggcaaattgtactgataaatgggtgtgaatttgctgctgtatctattctg
gcccttgagaacgacttcaggattccggactctttgccttgttttcatgatacagtccta
gcagctgccttcgatgcaactgttaaaagtgaggatacgtcccatgggattttaggtggt
atttttaagggcttaataggtggtaagcaggatagaaacatgcaaattaaagaagcttgc
aggaacgatttcccacaattggagagcatattttctagtcccccattcttaaagccttcc
acggccagcacggatgacaaagaagtcatcaatcttaacatagatgacatcctaattgat
gagaaaatcactgtcttccctaaatctgagacaatcaataatgatgagaaaaataaaaga
gagagactatttgagggttcaagtactgatgcaaaaccaacagtcagatcagtttacgag
atcagggccaagtatcgaggaccggaggatgctgcggctgcggctgcacgggcaagggac
cggcttatagagcggcaggaaaagcttgagaggatcaatgaccggtcacaagagctacaa
aacgaggcagagaactttgcatccattgcacatcaacttgccaggaaaatggaaaagaaa
aaatggtggaatatatga
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