Gossypium hirsutum (upland cotton): 107955252
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Entry
107955252 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107955252
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107955252
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107955252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-RING_4
Prok-RING_4
Zn_ribbon_6
zf-ANAPC11
zf-RING_10
zf-rbx1
Zn_ribbon_LapB
Sina_RING
Rtf2
Motif
Other DBs
NCBI-GeneID:
107955252
NCBI-ProteinID:
XP_016746483
UniProt:
A0A1U8P862
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All DBs
Position
A07:46097050..46100454
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AA seq
207 aa
AA seq
DB search
MSTIEVRGPSLRGYRRRKALLDLNVPPTEIREQEGTSQQAGSEQLTAQPVQPPPPATIDV
EAIDDDVIESSAIAFAAAKNNSRRSRGRTVVDVDSGRLARSTNNNLNRCRRLPPSPVVIN
CDRYINLESSPQSMVKEITKPQPLPKEPTFNCPICMGSLNEEMSTRCGHISCKACINAAI
AAQGKCPTCRKRVTVKELIRVFLPSAS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaatagaagtgagggggccttctcttagagggtatcgacgaaggaaggcactc
ctggatctcaatgttcctcccactgaaatcagggaacaggagggtacttcgcagcaggct
ggatctgagcaactgactgctcaacccgtacagcctccaccacctgcaactattgatgtt
gaagctattgatgatgatgtaattgaatcttctgctatagcattcgcagcggctaaaaac
aattctaggagaagccgtggaaggactgttgttgacgtagattcagggcggcttgctcgg
tcaactaataataacctgaacaggtgccggagacttcctccgtccccagtagttatcaat
tgtgatcggtatatcaatttggagagttcaccgcagtctatggtcaaggaaattacaaag
ccccagccacttcccaaggagccaaccttcaattgtccgatttgtatgggttcattaaat
gaggagatgtcaacaagatgtgggcacatttcctgcaaggcatgcatcaacgctgcaata
gcagcccagggaaaatgcccaacttgcaggaaaagagtgactgtaaaggaactaattagg
gtcttccttccatcagccagctga
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