Gossypium hirsutum (upland cotton): 107955378
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Entry
107955378 CDS
T04793
Name
(RefSeq) glutamate receptor 1.2-like isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107955378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107955378
04121 Ubiquitin system [BR:
ghi04121
]
107955378
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107955378
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107955378
Ubiquitin system [BR:
ghi04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
107955378
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107955378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
107955378
NCBI-ProteinID:
XP_016746645
UniProt:
A0A1U8P6A1
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Position
A07:92874636..92881808
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AA seq
427 aa
AA seq
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MYFPRKVKWTFFVVTTLFSLVQPLSANHTSINDTAIEMIHVGLILDAQSWVGKIVDSCIS
MAISDFYSRNHHYQTKLVVHTRDSGGDPLLLLSQALVFLENFKSDAIIVAENSAGVKILV
ELGSRVKIPIISLFATGQSLSSFEYPHLIQIGEDESSRAKAIAAIVEAFSWRSAILIYED
NDSARPILSNVTGFHLDQHVALLTSSTDEEIVQQLVKLMSLQMTVYVVHMSPILASRLFL
NAKQLGMMTQGYAWITTDMITNFMNSMDPSVFESMQGVVGFKPHIPASKELHKFAIRWRS
KNLNENKNLEEMEMNVYGIWGYDMVWAVATAAERVMTRHPHILHQETRLSMNFTTIRSSE
SGLVFMDELLQSRFEGISGGFQLTNGRLIPKEIEIVNVFKGERIIGYWNPENGIASIMKE
ENHTETN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcccaagaaaggttaagtggaccttctttgtagttacaaccttgtttagtctt
gtacaaccattgtcagccaatcatacaagtatcaatgatactgccatagaaatgattcat
gtggggttgattcttgatgcgcaatcttgggtgggaaaaattgttgatagctgcatttcc
atggctatatctgatttttacagtcggaatcatcactatcaaacaaaactagttgtgcat
accagagattctgggggtgatccgttgcttcttctatcccaagccttggttttcttggaa
aatttcaaatcggatgccattattgttgcggaaaattcagctggagtgaagattttagtg
gagttgggttctagagtcaaaattccaattatttcactctttgcaactggtcaatctttg
tcctcctttgagtatcctcatttaattcaaattggtgaagatgagtcttctcgagccaaa
gccatcgctgccattgttgaagcattcagttggagaagtgctatcctcatttatgaagat
aatgattctgcaagaccaatcctttctaatgtgactggttttcatcttgatcagcatgtt
gcccttctaacatcatctactgatgaagaaatcgttcagcagctcgtgaagctcatgagt
ttgcagatgactgtatatgtggtgcatatgtcacctattctagcatctcgacttttctta
aatgctaaacagcttggaatgatgactcaagggtatgcttggattacaactgatatgatt
actaatttcatgaattcaatggatccatcagtctttgagtcaatgcagggggtggtagga
ttcaaacctcacattccggcatcaaaggagcttcacaagtttgcaatcaggtggaggagt
aaaaacttaaatgaaaataaaaatttagaagaaatggagatgaatgtgtatggcatatgg
ggctatgatatggtttgggctgtggcaacagcagcagaaagggtaatgactcgacatcct
catatcctacaccaagaaaccagattgagtatgaacttcaccactattcggtcctcagaa
agtggtttggtatttatggatgagttattacagagtagattcgagggaataagtggtggc
tttcaacttactaatggcaggctgatcccaaaagaaattgaaattgtaaatgtattcaag
ggagaaaggataattggttattggaatccagaaaatgggattgcctcaataatgaaggaa
gaaaaccacactgaaacgaactga
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