KEGG   Gossypium hirsutum (upland cotton): 107955479
Entry
107955479         CDS       T04793                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03250  Viral life cycle - HIV-1
ghi03272  Virion - Hepatitis viruses
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107955479
   03272 Virion - Hepatitis viruses
    107955479
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107955479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107955479
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107955479
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    107955479
Exosome [BR:ghi04147]
 Exosomal proteins
  Proteins found in most exosomes
   107955479
SSDB
Motif
Pfam: UEV Vps23_core Cortex-I_coil RWD CENP-Q
Other DBs
NCBI-GeneID: 107955479
NCBI-ProteinID: XP_016746762
UniProt: A0A1U8P6A7
LinkDB
Position
A07:95064301..95065308
AA seq 335 aa
MAPPSPKEFIEAALVATTTPYALSYTDSKQKWVILRHLLSLLQEFPGFKPSAGRFMHNDG
TEVNLLRATGCVHVANSTTPTIPLVIWLHENYPQKAPLVFVSLHLMTPIHRHHPFVDNTT
GATSPPYILTWKYPPCNLSELLRNLVQIFTIDHPFSYTPTTPACLTHPWLVSTKEALDRL
VGMLHYDMVALRASTSDEIEKLSLLQEELKRRDRFITSMVAELGEERMRLEERVKNWAEE
TDRVENWLRVNDGRSLNARDVEIEDAFEMDETTRARLESSAADLAIEEVMYKLDKALEHE
AVSFDSYIKQVRSLARQQFFHRCNEMASTSSPTSV
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcaccaccatccccaaaggaattcatagaagcagctcttgttgccaccaccacccct
tatgctttatcctacacagactctaaacagaaatgggttatattaagacacctcctttcg
ttgcttcaagaattccctggtttcaagccctcagctggtagattcatgcacaacgatggc
accgaagttaaccttctacgagctaccggctgcgtccatgtcgccaatagtacaacaccc
accattcctctcgtcatttggctccatgaaaactaccctcaaaaggcacctttggtcttt
gtttcactccacctcatgaccccaattcatcgccatcatccttttgtggataacaccacc
ggtgccacttccccaccttatatccttacctggaaatacccaccgtgcaacctctctgaa
cttttgcgaaacctcgtccaaatttttaccatcgatcatcctttctcgtacacgccgacg
actccggcgtgtctcactcacccttggctcgtttctacaaaggaagctctggatagactc
gtgggtatgcttcactacgacatggttgctttgcgggcaagcacgtctgatgaaatagag
aagctgtcgttattgcaagaagaacttaagaggcgtgatcgtttcatcaccagcatggtt
gccgagttgggtgaggaaaggatgaggctggaagagagagtcaagaattgggcggaagaa
actgatagggtggagaattggttgagagttaatgatggaaggtccttaaatgcaagggat
gtcgaaattgaggatgcatttgaaatggacgaaacgacaagagccagattagaatcctcg
gctgcggatttggctattgaagaagtaatgtataaattggacaaggcacttgaacatgaa
gcagtaagtttcgattcatatattaaacaagtgaggagcttagccagacaacagttcttt
catagatgtaatgaaatggcctcaacctcatcccccacctctgtataa

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