Gossypium hirsutum (upland cotton): 107955504
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Entry
107955504 CDS
T04793
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107955504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107955504
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107955504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Cytochrome_B
PLU-1
ETRAMP
Fusion_gly
Exonuc_VII_L
XhlA
Motif
Other DBs
NCBI-GeneID:
107955504
NCBI-ProteinID:
XP_016746782
UniProt:
A0A1U8P916
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Position
A07:94751476..94754430
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCELSANLSKKCTAAVALTGEQKKQKLSDVRAGVEDAEALIRKMDLEAR
SLQPNVKAVLLAKLREYKSDLNNLKSEVKRIASGNLNAAARDELLESGMADTLTASADQR
SRLMMTTERLNQSSDRIKDSRRTMLETEELGVSILQDLHSQRQALLHANNTLHGVDDNIG
KSKKILTAISRRMSRNKWIIGTIIAILIIAIALVLYFKLAK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagttttcgaaggatatgaacggcagtattgcgagctatctgcgaatctttcc
aagaagtgtacggctgctgttgctcttactggagagcagaagaaacaaaaactttctgat
gtaagagctggagtggaagatgcagaagctctgattcgaaagatggacctcgaagcaaga
agtttgcagccaaatgttaaggctgtacttcttgctaagttaagggaatataaatcagat
ctaaacaatctgaaaagtgaagttaaaagaatcgcatctggtaatttgaatgcggctgct
cgagacgagttgttagagtccggcatggctgatactctcacggcatcagctgatcaaaga
tcaagattaatgatgactacagagcggttgaatcagagcagtgacagaattaaggacagc
aggagaaccatgttagaaacagaagagcttggggtttcaatccttcaggatttgcattca
cagcgacaggctctcttacatgccaataacacgctccatggagtagatgacaacatcggc
aagagcaagaaaattttgacagctatttctaggaggatgagcaggaacaagtggatcatt
ggcaccattatcgccatccttatcattgcgatcgctcttgttttgtacttcaaacttgct
aaatag
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