Gossypium hirsutum (upland cotton): 107955525
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Entry
107955525 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107955525
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107955525
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107955525
03036 Chromosome and associated proteins [BR:
ghi03036
]
107955525
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107955525
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107955525
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107955525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
107955525
NCBI-ProteinID:
XP_016746802
UniProt:
A0A1U8P6E5
LinkDB
All DBs
Position
A07:95959371..95965932
Genome browser
AA seq
545 aa
AA seq
DB search
MSLSLKMEIDTVEDVTCLNPELLQLPEVSPFALKTTPLLVDDLFSQWLSLPETGNLVKSL
INDAKAGTAINACANFSNVNAVGSNSLPSMFSSVNAPPLSPRSSSGSPRSSKQKSSPSAL
GSPLKLFSDPMQEVIPQFYFQNGRPPTKELKEQSLSKINHLFNNPLNGLLIDEFKTVTKE
VCKLPSFLSSALFRKIDVDCVGIVTRDAFITYWVDGNMLTMDVATQIFEILKRPGNRHLT
QVDFRPILRELLATHPGLKFLQNTPEFQDRYAETVIYRIFYHMNRSGNGRLTRRELKRGE
LISAMQQADEEDDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIRYGNHALTYR
IVDRIFSQAPRKFAGDVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDGNGVLTPN
EMQFFYEEQLHRMECLALEPVLFEDILCQIIDMVAPEREDCITLQDLKGSKLSGNVFNIL
FNLNKFMAFETRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDVEDASNGSADVWDES
LEAPF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttatctttaaaaatggaaatcgatacagtggaagacgttacttgtttgaaccct
gagcttttgcagcttcctgaagtgtccccatttgcactaaaaaccactcctctacttgtc
gatgacttgttctctcaatggctttcacttccggaaactggcaatctggtgaaatctttg
atcaatgatgcaaaggcagggactgcaatcaatgcctgtgcaaacttttctaatgtaaat
gctgttgggagcaactcattgccttccatgttttccagtgtcaatgcacctccactttct
ccaagaagctcatcgggttctcctcgctcatcaaagcagaaatccagcccttcagctctt
ggctctccattgaaattatttagtgatccaatgcaagaagtcattccacagttttatttt
caaaatggtcgtcctcctacaaaggaattgaaagaacaatctctttctaaaattaatcac
cttttcaataatcctctaaatggattgctaatagatgagtttaaaacagtgacaaaggaa
gtttgcaagctaccatcttttctatcttccgcgctttttagaaagatagatgtagactgc
gtgggaatagtgaccagagatgctttcattacgtattgggtggatggcaatatgctgaca
atggatgtagccactcaaatatttgaaattcttaagcggccaggcaacaggcacctcact
caggttgacttcagacccattcttcgagagcttttggcaacccatccaggattgaaattc
ttgcaaaacacacctgaatttcaagatagatacgctgaaactgtcatatacagaatcttt
tatcacatgaatagatcgggaaatggccgtcttacccgcagggagctcaaacgtggagaa
ctgatttctgccatgcaacaagcagacgaggaagatgacattaataaagtccttaggtac
ttctcctatgagcacttctatgttatatactgtaagttctgggagttggacacagaccat
gatttcttcatcgacagagaaaacctcatcagatatggcaatcatgcccttacctacaga
atcgttgatagaattttttcacaagctcctcggaagtttgctggtgatgtagaagggaag
atgggttatgaagactttgtttacttcatgctctcagaggaggacaaatcatctgaacct
agtcttgaatattggttcaagtgcatagatttggatggaaacggtgtgctcactccaaat
gaaatgcaatttttctatgaggagcagctgcaccgaatggaatgcttggccctagaacct
gtgctctttgaggacatattgtgtcaaataattgacatggttgcacccgagagagaagac
tgtatcacattacaggacttgaaagggagcaaactttcaggaaatgtttttaacatcctt
tttaatcttaataagtttatggcattcgaaacccgtgatccattcctcattcggcaggaa
cgagaggatccaactttgacagagtgggatcgctttgcacatagggagtatatcaggctt
tcaatggaagaagatgttgaagatgcctcaaatggaagtgctgatgtatgggatgagtcc
cttgaagctccattctaa
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