Gossypium hirsutum (upland cotton): 107955901
Help
Entry
107955901 CDS
T04793
Name
(RefSeq) poly [ADP-ribose] polymerase 1-like
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107955901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107955901
03036 Chromosome and associated proteins [BR:
ghi03036
]
107955901
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107955901
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
107955901
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107955901
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
107955901
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107955901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
BRCT_3
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107955901
NCBI-ProteinID:
XP_040966695
LinkDB
All DBs
Position
A04:complement(3422970..3433557)
Genome browser
AA seq
686 aa
AA seq
DB search
MMFGALGKCPMCSGCLRFSGGKYRCHGYISAWSKCSYSTCEPERLKGKWKVPDETNNEFL
SKWFKSQKIKKPARILPPASASSSQAANGQSQTSNVESLANLKVSIVGLPKESLEEWKGK
IKEAGGMVHAKIKTDTNCLVVSGDSEGHDAERRKARRMRLPIVREDYLVDCFKKQNKLPF
DLYKVEAIGEASSMVTVKVKGRSAVHEASGLQDSCHILEDSGSIYNTTLNLSDLSTGVNS
YYILQIIQEDKGSGCYVFRKWGRVGNEKIGGSKLEEMPKSDAISEFKRLFLEKTGNSWEA
GEKKQNFQKQPGRFFPLDIDYGVNKQVLEKKHTDADSQLPPPLLELVKMLFNVETYRAAM
MEFEINMSEIPLGKLSKSNIQKGFEALTEIQNLLNSDASDPSLKESFIVDASNRFFTVIP
SIHPHVIRDEDDFKAKVKMLEALQGIEIASRLVGFDVDNDDSLDEKYKKLHCDITPLPHD
SEDFQLIEKYLLTTHAPTHTDWKLELEEVFSLEREGELDKFAPFREKLSNRMLLWHGSRL
TNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDRKNPVGLMLLSEVAL
GEVYELTKAKYIEKLPKGKHSTKGLGKKVPKRSDFVKWKDDIIVPCSKPVPSSVKESELM
YNEYIVYNTSQVKIQFLLKVRFHHKR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggagcacttggtaaatgcccaatgtgttctggttgtcttcgcttttctgga
ggcaaatatcgctgccatggctacatttcagcatggagcaagtgttcttactctacttgt
gaacctgaacgtcttaaagggaaatggaaagtaccagatgaaacaaataatgaatttctt
agcaagtggtttaaatcacaaaaaattaaaaaacctgctcgcatcctgcctccagcttct
gcttcttcaagtcaagctgctaatggccaatctcaaacttcaaatgttgaaagcttggca
aatttgaaagtttccattgttggattgcctaaggagtctttggaagagtggaagggaaaa
atcaaggaagcaggtggtatggttcatgccaagatcaagactgatacaaattgcttggtt
gtgagtggggactcggagggtcatgatgctgagaggaggaaggcaaggagaatgagattg
ccaattgttagggaggactatcttgtagattgttttaaaaaacagaataagcttcctttt
gatttgtacaaagttgaagccatcggtgaggcctctagcatggtcactgtcaaagtaaaa
ggacgaagtgctgtgcatgaagcctctggtctgcaagattcatgtcatatacttgaggac
agtggaagtatatataacacaactctgaacttgtccgacttatcaaccggtgttaacagt
tactacatcctccaaataatccaagaagataaagggtctggttgttatgtattccgtaaa
tggggtcgtgttgggaatgaaaaaattggcggaagcaaattggaagagatgccaaaatca
gatgcaatctctgaattcaaacgtttatttctagagaaaactgggaactcatgggaggca
ggggaaaagaaacaaaatttccagaaacagcctggcagatttttcccattggatattgat
tatggagttaacaaacaggtgttagaaaagaagcacactgatgcagatagtcaacttcct
cctcccttgcttgaattggtgaagatgctttttaatgtggaaacatacagggccgcaatg
atggagtttgagattaatatgtcggaaattccccttggaaagctaagcaaaagcaatatt
cagaaaggttttgaggcattaacagagatacaaaatctattgaatagtgatgcttctgat
ccttctctcaaagaaagctttattgttgatgccagcaatagattttttactgttattcct
tctatccatccacatgtcataagggatgaagatgattttaaggcaaaggtgaaaatgttg
gaagctcttcaaggcattgaaatagcctcaagactagtaggttttgatgttgacaatgat
gactcccttgatgaaaaatataagaaactccattgtgatattactccccttcctcatgat
agtgaagattttcagttgattgagaaatatctccttaccactcatgcccctactcatact
gattggaagcttgaattggaagaagtattctcacttgaaagagaaggagaacttgataag
tttgctcctttcagagaaaagcttagtaacagaatgcttctctggcatggttctcggttg
acaaattttgtagggatacttagccagggactaagaatagctcctccagaagctccagcg
actggctatatgtttggcaagggggtctattttgctgatttggtcagtaagagtgctcag
tattgctttacagataggaaaaatcccgtgggcctcatgcttctcagcgaagttgcttta
ggggaggtctatgaactaacaaaggccaagtatatagaaaaactaccaaaaggaaagcac
tcaacgaaagggctcggaaagaaagtacctaagaggtctgactttgtaaagtggaaggat
gacattattgttccttgtagcaaaccggttccatccagtgtgaaggaatctgagctgatg
tataatgaatacattgtttataacacttctcaagttaagatacagttcctgttgaaagtg
aggtttcatcacaagaggtga
DBGET
integrated database retrieval system
