KEGG   Gossypium hirsutum (upland cotton): 107955957
Entry
107955957         CDS       T04793                                 
Name
(RefSeq) U6 snRNA phosphodiesterase
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107955957
Spliceosome [BR:ghi03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    107955957
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2 CRM1_repeat_3
Other DBs
NCBI-GeneID: 107955957
NCBI-ProteinID: XP_040953123
LinkDB
Position
D07:5379716..5382216
AA seq 290 aa
MEALRATYGDDDSSDFDSDHSPTLSLPANSNPQSEETLSSPLPPPPVSLLHPPNSLGSLD
YLQTGQPSRVRSFPHVEGNYALHVYIPVFIPSISKKEMGQFLKRVSSVVSNLHVVDIDVP
LNTLCKEEHKLEQVALGREFHISLGRTVPIRVHQIDSIVTMLRQKLQFQKRYWIDFNKWE
VFINDDRTRTFLSLEVVTGGLPEITKQIQAVNEVYKLHNLPEFYKDPRPHISLAWALGDI
SGSLKKVVEQETKSSVFRGSLQSRICTSKVGGIECKIGNRTHIICKSPDQ
NT seq 873 nt   +upstreamnt  +downstreamnt
atggaagcgctaagagcaacatatggagacgacgactcatcggacttcgactccgaccac
tcccctacgctgtctcttcccgccaattccaatccccaatcggaggagacgctgtcgtct
cctctccctccgcctcctgtttctctccttcaccctcccaattcccttggatctttggat
tacttacaaactggtcagcctagtagagtgagaagcttccctcacgtcgaaggcaactat
gctttgcacgtttacattccagtttttataccgtctatatcaaagaaagagatgggtcaa
tttttgaagagagtttcatccgtggtttccaatctccatgttgtggatattgatgttcca
ttgaatacactgtgtaaagaagaacataaacttgaacaagtggcattgggaagggaattc
catataagtttaggaaggacagttcctattagagttcaccagattgactctattgtaaca
atgcttcgccagaaacttcaatttcaaaagcggtattggattgattttaacaaatgggag
gtttttatcaatgatgatcgaacgcgcacctttctttcactcgaagtcgttacgggagga
ttacccgagataactaagcaaattcaggctgttaacgaggtttacaagcttcacaatctt
cccgagttctataaggatccaaggcctcatatatcattggcttgggcactaggtgacatt
agtggttcccttaagaaagtggtcgagcaggaaacaaagtcatccgtctttagaggttcc
ttacagagtcgtatttgtacaagtaaagttggtggcattgagtgtaaaattggtaataga
acacatataatatgtaaatctccggatcaatga

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