Gossypium hirsutum (upland cotton): 107956010
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Entry
107956010 CDS
T04793
Name
(RefSeq) two-component response regulator ARR12-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107956010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107956010
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
107956010
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
107956010
NCBI-ProteinID:
XP_016747257
UniProt:
A0A1U8P7R0
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Position
D07:11488359..11490809
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AA seq
571 aa
AA seq
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MRVERIINETNDEFPIGIRVLAVDDDPTCLLLLETLLRRCKYNVTTTNQAITALKLLRQN
KFDLVICDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTNVVMKGITHGACDYLLKPVR
IEELNNIWQHVVRRKRFERKDWYNSDSQDKLRADSGEAVGMGSISNNGKLKKKRKDQDED
EERDENGHHNNEDPSIRKKPRIVWSAELHSKFVAAVNQLGMKNATPKKILELMNVEKLTT
QNVGSHLQKFRLYLKRISCAANQQVNIAAAVRMRSPNGLGNFHTLAGSNQLHNAAFRSFP
PRGVLGRLNTHAGLLIRGLPSPRTIRSGHGQSSVNSGNDQSKLQSFVSGIHNANILQGLP
MSLELDQGQTNNGVSHIGELPIADSTTVFPVSSSLIDATITGFSGNPLLGVTSHSLMLEA
SSQQASNSRDIVPAIGFRNENTLSDFAPLAPASNRESNADLQCEPIPINCNAGELISSAP
QEWNSPYQSNVTPCSMNSSIPVSGTMVQFGLCLDQNNSMDSDSIGPSSFIDNSAMEQSII
DKEGYLMLEPWEQGSHIPYNIGLLEDLWELQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagagtagagcgaataatcaatgaaacaaatgatgagtttcccattggcattcgagtt
ttggccgttgatgatgatccaacttgtcttttactgctcgagactctgcttcgtcgatgc
aaatacaatgttaccacaacaaatcaggctattacagcattgaaattgttgaggcaaaac
aagtttgatttagtgatttgtgatgttcatatgcccgacatggatggttttaagttactt
gagcttgtcggactcgagatggacttgcctgtcataatgttatctgcaaatggtgatacc
aatgttgtcatgaaagggattactcatggagcttgtgattatttgctgaaacctgttcga
atcgaagagttaaacaatatatggcaacatgtagtcaggaggaagaggttcgagaggaaa
gattggtataattccgatagccaagacaagcttcgtgccgatagcggtgaggctgtaggg
atgggaagcattagtaacaatgggaagttaaagaaaaagcggaaagatcaagacgaggac
gaggagagggatgagaatgggcaccataacaacgaggatccatcgattcgaaaaaaacct
cgtattgtttggtcagctgagttgcacagtaaattcgttgcagcggttaatcagttgggc
atgaagaatgctactcctaaaaagatcctggaattgatgaatgtggaaaagcttaccaca
caaaatgttggcagccatctgcagaaatttaggctttacctgaaaagaatcagctgtgcg
gcaaaccaacaagtgaacattgcagccgctgtacggatgaggtctccaaatggacttggg
aattttcataccttggccggatctaatcagcttcataatgcagcctttagatctttccca
cctaggggtgtgcttggaagattgaacacgcatgctgggctgcttatacgcggccttcca
tctcctcgaactattcgatcaggtcatgggcaaagctcggttaattccggtaatgatcag
agcaagttgcaatcttttgtttctggaatccataatgctaacattctacaaggcctgcct
atgtcactagaacttgatcaaggacaaactaacaatggtgttagccacattggagagctg
ccgattgctgatagtacaactgttttccccgtttctagcagtttaatagatgcaacaata
accggattctccggtaatccacttcttggtgtcacaagccactctttgatgttagaagca
agctctcagcaagccagtaattcgagagatattgttcctgcaataggcttccgaaacgag
aatactttatcggactttgctcccttagctccggcttctaatcgggaatcaaatgcggat
ttacaatgtgaaccaatcccgatcaactgtaatgctggggaattaatctcaagtgctcct
caagaatggaattccccctaccaatcaaatgttacaccttgctcaatgaactcttcaatc
cctgttagtggtactatggttcagtttggcctgtgcttggaccaaaataactcgatggac
tcggattctatcggaccgtcaagtttcatcgacaactcagctatggaacaatcaattatt
gacaaggaagggtacctaatgttggaaccatgggaacaggggagtcacataccttataac
attggtttattggaagatctctgggaattgcaatga
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