Gossypium hirsutum (upland cotton): 107956114
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Entry
107956114 CDS
T04793
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107956114
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107956114
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Motif
Pfam:
Glyco_hydro_28
Nab2-zf4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107956114
NCBI-ProteinID:
XP_016747344
UniProt:
A0A1U8PAS0
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Position
A13:complement(487958..488878)
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AA seq
224 aa
AA seq
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MFHVVINGCENVDVQGVRIIAAGNSPNTDGIHVQLSKNVNIIKCSIKTGDDCISIGPGTK
NLWIEQVTCGPGHGISIGSLAKDLKEEGVQNVTVRNTIFLGTQNGLRIKSWARPSTGFVQ
GVRFTDSLMRNVQNPIVIDQNYCPHNLNCPNQVSGIKIKDIIYEGIRGTSSTQVAIKFDC
SPKNPCTGIKLQNVNLSYLNKPAQSFCSNVRGKALNFVRPESCL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacgtcgtgatcaatggatgtgaaaatgtggatgtccaaggggttaggattatc
gccgcaggtaatagccccaataccgatggcatccatgtccaattatccaagaatgtgaat
atcataaaatgctcaatcaaaactggagacgattgcatctcgattggtcccggtaccaag
aatttatggatcgaacaagtcacttgtggtcctggccatggcattagcattggaagttta
gcaaaagatttaaaagaggagggggttcaaaatgtcactgtaagaaatacaatctttttg
ggcactcaaaatgggctaaggatcaagtcatgggctaggcctagtactggatttgttcaa
ggagttcggtttacagattctttgatgagaaatgtgcaaaatcctattgtaattgatcag
aactattgcccacacaatctaaattgtcccaatcaggtatccggaattaaaattaaagat
attatatacgaaggtattcgaggaacgtcatccacacaagtagctataaaatttgattgt
agcccgaagaatccatgcaccgggataaaattgcagaatgtcaatttgtcatatttgaat
aaacctgctcaatcattttgttccaatgttcgtgggaaagcattgaattttgttcgacca
gaaagttgcttataa
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