KEGG   Gossypium hirsutum (upland cotton): 107956114
Entry
107956114         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107956114
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     107956114
SSDB
Motif
Pfam: Glyco_hydro_28 Nab2-zf4 Beta_helix
Other DBs
NCBI-GeneID: 107956114
NCBI-ProteinID: XP_016747344
UniProt: A0A1U8PAS0
LinkDB
Position
A13:complement(487958..488878)
AA seq 224 aa
MFHVVINGCENVDVQGVRIIAAGNSPNTDGIHVQLSKNVNIIKCSIKTGDDCISIGPGTK
NLWIEQVTCGPGHGISIGSLAKDLKEEGVQNVTVRNTIFLGTQNGLRIKSWARPSTGFVQ
GVRFTDSLMRNVQNPIVIDQNYCPHNLNCPNQVSGIKIKDIIYEGIRGTSSTQVAIKFDC
SPKNPCTGIKLQNVNLSYLNKPAQSFCSNVRGKALNFVRPESCL
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtttcacgtcgtgatcaatggatgtgaaaatgtggatgtccaaggggttaggattatc
gccgcaggtaatagccccaataccgatggcatccatgtccaattatccaagaatgtgaat
atcataaaatgctcaatcaaaactggagacgattgcatctcgattggtcccggtaccaag
aatttatggatcgaacaagtcacttgtggtcctggccatggcattagcattggaagttta
gcaaaagatttaaaagaggagggggttcaaaatgtcactgtaagaaatacaatctttttg
ggcactcaaaatgggctaaggatcaagtcatgggctaggcctagtactggatttgttcaa
ggagttcggtttacagattctttgatgagaaatgtgcaaaatcctattgtaattgatcag
aactattgcccacacaatctaaattgtcccaatcaggtatccggaattaaaattaaagat
attatatacgaaggtattcgaggaacgtcatccacacaagtagctataaaatttgattgt
agcccgaagaatccatgcaccgggataaaattgcagaatgtcaatttgtcatatttgaat
aaacctgctcaatcattttgttccaatgttcgtgggaaagcattgaattttgttcgacca
gaaagttgcttataa

DBGET integrated database retrieval system