Gossypium hirsutum (upland cotton): 107956816
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Entry
107956816 CDS
T04793
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107956816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107956816
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107956816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
SYNRG_C
CFA69_ARM_rpt
Motif
Other DBs
NCBI-GeneID:
107956816
NCBI-ProteinID:
XP_016747812
UniProt:
A0A1U8P9C5
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All DBs
Position
D07:50266408..50270271
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AA seq
307 aa
AA seq
DB search
MVSGAAAPLTFNPPARVRYLIRGLASEETREQSLDVLCKNRLAYDNLAVLLWHSFGIMGV
LLKIITSAYRPLLSDGLTENAVTQVCNAIALFQCVASHPDTRIPFIRATMPVYLYPFLNT
MSNERSYECLRITSLGVIGSLAKVEDPEVIEYLLSTQIFPSCLRCMEVGKTLSRTVSTFI
IYRILLSEKGLKYCFVLAERYLSVSQCLGKLVENLSEDDAENLPHLLKNIIGCYLRLSEN
ERTRPQLSSYIPWKLLDGKYANIVRSDPMALADLRQLVCNLRTSKSCTAHCTDEPPASSD
SPGTSIP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaggtgcggctgctccactcactttcaaccctcctgctagagtcagatatttg
attcgaggtcttgcttctgaagaaacccgagagcaatcacttgatgttctttgcaagaat
agactggcttatgacaatttggcagtgctgttatggcattcttttgggattatgggtgtc
cttttgaagataataacttcagcttaccgtccactgttgtccgacggccttactgaaaat
gctgtaacacaagtctgcaatgctatagcccttttccagtgtgtagcttctcaccctgat
acaaggattccatttatcagagctacaatgccagtgtatctatatcccttcttgaacacc
atgagcaatgaaaggagctacgaatgtctaaggattaccagcttaggtgtgatcgggtcc
ctagcaaaggtagaggatccagaagtgatagagtacctgctttcaactcaaatatttccc
agttgcctacgctgcatggaggttggcaaaacattgtcaagaacagtgtccacatttata
atttacagaatcttactaagtgagaaagggctcaagtactgtttcgttcttgctgaacga
tatctctcagtatcccaatgtttggggaaattggttgaaaaccttagtgaagatgatgca
gaaaatttgcctcacctcctcaaaaacatcatcggatgttacctcaggctctccgaaaac
gaaaggaccaggccacaactgtcgagctatattccatggaagttgttagatggcaaatat
gctaacatcgttcggagtgatccaatggcccttgctgacctacgacaattggtttgcaat
ttaaggaccagcaagagttgtacagcccactgtaccgatgagccaccagctagcagcgac
tcacccggaacgtccattccatga
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