Gossypium hirsutum (upland cotton): 107957228
Help
Entry
107957228 CDS
T04793
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107957228
00071 Fatty acid degradation
107957228
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107957228
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107957228
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107957228
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107957228
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107957228
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107957228
Exosomal proteins of breast cancer cells
107957228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
DUF5999
Motif
Other DBs
NCBI-GeneID:
107957228
NCBI-ProteinID:
XP_016748174
UniProt:
A0A1U8PD20
LinkDB
All DBs
Position
A05:complement(67398937..67428116)
Genome browser
AA seq
749 aa
AA seq
DB search
MLGAPIKISSSPSCCSSSENRKAIMLSPVCLDKSRSFQFLFSGSKLRCSKTLDTKQLSSA
KFKVSRGSKFRVFCDSKTQELQIRRCSPLLEKASLPSNCAPLSDEWKAVPDIWRSSAEKY
GDRVALVDPYHDPPSTLTYNQLEQEILDFTEGLRVIGVKPEEKYALFADNSCRWLVADQG
IMATGAINVVRGSRSAVEELLHIYNHSESVGLVIDNPEFFNRLAGKFCSNARMRFIVLLW
GEKSRLAKNETLGVPVFSYKEIVKLGREYRAALIDSLDARKGYRYEVIGSDDIATLVYTS
GTTGNPKGVMLSHKNLLHQIENLGVLGPAKAGDRFLSMLPTWHTYERACEYFIFTRGIEQ
VYTTVRTLKDDLRNYKPDYMISVPLVYETLYSGIQKQISSSPNAIKLIVFSFIRISLAYT
ELKRIYEGLCLTRNPEEPSHIVSMFDYLWSKTIATILWPLHVLATKFVYKKISSAIGIQK
TAKSGGGSLPTHIEKFYEAIGLEVQNGYGLTETSPCIAGRRPYYNVLGSVGHPIPLTEFK
VVDSETGEILPLGSKGIIKVRGPPVMKGYYKNPLATRQALDEDGWLNTGDIGWIAPHHSV
GRSRRCGGVIVFEGRAKDTIVLSSGENIEPLEIEEAALRSPLIQQIVVIGQDQRRLGAII
VPNKDEALLAAKEASIVDADAVDLSKDKITSMLYEELRKWTSECSFQIGPILVVDEPFTI
ESGLLTPTMKIRRDRVVAQYKEEIANLYK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgttgggggctccgatcaaaatatcttcttcgccttcttgctgttcttcttctgaaaat
agaaaggcgatcatgttgtcgccggtttgtttagataaatcgaggtcttttcagtttctt
ttctcgggttctaaattgcggtgctccaaaactttggataccaagcagctctccagcgcc
aagttcaaggtctcccgaggatcgaaatttcgagttttctgtgactccaagacacaagag
ttgcagattagaaggtgttcgcctttactagaaaaggcatcactgccaagtaattgtgca
ccgctctcagatgaatggaaagcagtcccagacatttggaggtcttcagcagagaagtat
ggcgatcgagtagcgttggtggatccatatcatgatccaccctctaccttgacatataac
cagttggagcaggaaatattggacttcaccgaaggtttaagggttattggagtaaagcca
gaagagaagtatgcacttttcgctgataattcgtgcaggtggctcgttgcagatcaaggt
ataatggcaactggagctattaatgttgtcagagggtcaagatcagctgtggaagagctt
ttacatatatacaatcattcagaaagtgttgggcttgttattgacaatccagaatttttc
aatcgtcttgctggcaaattttgttccaatgcaaggatgagatttattgttctactttgg
ggggagaaatcacgcttggccaaaaatgaaacacttggtgtacctgtattcagttacaag
gagatcgtgaagttaggaagagaataccgtgctgcccttatcgattctcttgatgctaga
aaaggttacagatatgaagtgattggctcagatgatattgctacccttgtatatacaagt
ggaaccactggtaacccgaaaggcgttatgctttcacataaaaacttattgcaccagata
gaaaatttgggggttctcggacctgctaaagcgggggatagatttctaagtatgcttcct
acttggcacacatatgagcgggcttgtgagtatttcatatttacgcgtggaattgagcaa
gtatatacaactgtgagaactttgaaggatgatttgagaaattataagccagattacatg
atttcagtacctttagtgtatgaaacactctatagtggaattcaaaagcagatatcttca
agccccaatgccattaaattaatagtattttcattcataaggatcagcttggcatacacg
gagttgaagagaatttatgagggactatgcctaacaagaaatccggaggaaccttcacat
attgtatccatgttcgactacttatggtctaaaactattgctacaatattgtggccattg
catgtcttagcaacaaagtttgtctataaaaaaatcagctctgctatcgggatacaaaag
actgccaaaagcggaggtggaagtttgccaacgcatattgaaaagttttatgaggcaatt
ggtctggaagtgcagaatggatatggcttaacagaaacatccccttgcattgctggtcga
cgaccctattataatgttcttggttctgttgggcatccaattccactcacagaattcaaa
gttgtagattccgaaactggtgaaatcctcccacttggctccaagggcattataaaggtc
aggggaccgccagtgatgaaaggttattataagaatccattggctacgaggcaagcccta
gacgaagatggttggttaaatactggtgatataggttggattgctcctcatcattcggta
gggcgaagtcgtcgatgtggaggtgtgatagttttcgaaggacgtgccaaggacactatt
gttctttcttctggtgaaaatattgaacctttagagattgaagaagctgccttaaggagt
cctcttattcaacagatcgttgtaatcggccaggatcaacgacgccttggcgctatcatt
gtcccaaacaaagatgaagcactcctggcagcaaaagaggcatctattgtagatgcagat
gccgtcgatcttagcaaggacaaaattacaagcatgctatatgaagaattgaggaagtgg
acctccgagtgttcatttcaaattggaccaattcttgttgtggatgaaccttttacgatc
gagagtggcttattgaccccaaccatgaaaatccgaagagaccgagttgtggctcaatac
aaggaggaaatagccaatctctacaagtag
DBGET
integrated database retrieval system
