Gossypium hirsutum (upland cotton): 107957240
Help
Entry
107957240 CDS
T04793
Name
(RefSeq) probable zinc metalloprotease EGY1, chloroplastic
KO
K25380
zinc metalloprotease EGY, chloroplastic [EC:3.4.24.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107957240
Peptidases and inhibitors [BR:
ghi01002
]
Metallo peptidases
Family M50: S2P protease family
107957240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M50
Motif
Other DBs
NCBI-GeneID:
107957240
NCBI-ProteinID:
XP_040937486
LinkDB
All DBs
Position
A11:complement(93322449..93326628)
Genome browser
AA seq
559 aa
AA seq
DB search
MGTLTSFSFNAVNLRFSSSSIFRQRVGVQVFGSRKLNTKLCYLISKEVSREKFLKFRCFS
GTNNSNNDADYTQNDGEIKEDSSNTASSTESTVTTASPPEDKAVQEKRTSNELPPSLSSR
PPNIAPLGSVYNDFQIDSFKLMELLGPEKVDPADVKLIKDKLFGYSTFWVTKEEPFGDLG
EGILFLGNLRGKREDVFAKLQTQLAEIVGDKYNLFMVEEPDSEAPDPRGGPRVSFGLLRK
EVSEPGPTTLWQYVIAILLFLLTIGSSVELGIASQINRLPPEVVKYFTDPNAVDPPDMEL
LYPFVESALPLAYGVLGVLLFHELGHFLAAFPKKVKLSIPFFIPNITLGSFGAITQFKSI
LPDRSTQVDISLAGPFAGAALSFSMFAVGLLLSSNPDAAGDLVQVPSMLFQGSLLLGLIS
RATLGYAAMHTATVSIHPLVIAGWCGLTTTAFNMLPVGCLDGGRAVQGAYGKGALVGFGL
TTYTLLGLGVIGGPLSLPWGLYVLICQRTPEKPCLNDVTEVGTWRKTAVTVAVFLVVLTL
LPVWDELAEELGIGLVSTF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctcaccagctttagttttaacgccgtgaacttgaggttcagttccagttca
attttccgccaaagagttggggtccaagtcttcgggtccaggaaattgaacaccaagtta
tgttatttaatctccaaggaagtttctcgagaaaagtttctcaaatttaggtgttttagc
ggcactaataatagtaataatgacgctgattacacccaaaatgatggagagattaaggag
gatagtagtaatactgcttcatccacggaatccaccgtcacgacggcgtcgccgcccgaa
gataaggctgtgcaggagaaacgcaccagtaatgagctgcctccgtccctttcctccagg
ccaccaaacatagctcctcttggatcagtctacaatgatttccaaattgattcttttaaa
ttgatggagcttcttggacctgagaaagttgatcctgctgatgtaaagctaattaaggac
aagctttttggctattcaacattttgggtgactaaagaagagccatttggagaccttggt
gagggcatcctatttctaggaaatctaagagggaagagagaagatgtttttgccaaactc
cagactcaactggctgagatcgtgggtgataaatacaatcttttcatggttgaggagcct
gattctgaagccccagacccgcgtggtggaccacgagtgagtttcggtttgctgaggaaa
gaggtgtcagaacctggaccaactacactttggcagtatgtgatagctattttgctgttc
ctcctgactataggctccagtgtggagctaggtattgcatctcagataaaccgacttcct
ccagaggttgtaaaatactttacagatccaaatgcagttgatccaccagatatggaacta
ctatacccatttgtagagtcagcattgcccctggcatatggtgttttgggtgttctttta
tttcatgaacttgggcattttctggctgcttttccaaagaaagtaaaactaagcattcct
ttctttattccaaacatcactcttggaagctttggagcaattactcagttcaaatctatt
cttcctgaccgtagtacccaagttgacatttccctggcgggcccatttgctggtgctgca
ctgtctttttcaatgtttgctgttggtttgttgctttcatcaaatccggacgcagctggg
gatttggtgcaggttcctagcatgctgtttcagggttcattgcttctcggactcatcagt
agagcaacccttggttatgcggcaatgcatactgctacagtatcaattcatccacttgtg
attgcaggatggtgtggcttaaccacgacagcttttaatatgcttcctgtggggtgtctt
gatggtggacgggctgtgcagggtgcttatggaaagggcgcactggtcgggtttggtctg
acaacatacacactgcttggattaggagtgattggaggacctttatcgcttccttggggt
ctgtatgtgctgatatgtcagaggactcccgaaaaaccctgcttaaacgacgtaaccgag
gttggaacatggaggaaaacagcggttacggtcgctgttttccttgttgtgttgacccta
cttcctgtatgggatgagcttgctgaagagctaggtataggccttgtaagtacattttga
DBGET
integrated database retrieval system