Gossypium hirsutum (upland cotton): 107957505
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Entry
107957505 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107957505
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00270
Cysteine and methionine metabolism
ghi01100
Metabolic pathways
ghi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
107957505
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107957505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107957505
03032 DNA replication proteins [BR:
ghi03032
]
107957505
03036 Chromosome and associated proteins [BR:
ghi03036
]
107957505
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
107957505
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107957505
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
107957505
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107957505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
107957505
NCBI-ProteinID:
XP_040968139
LinkDB
All DBs
Position
A05:complement(31418795..31423858)
Genome browser
AA seq
1116 aa
AA seq
DB search
MIPVVNDDAEFDKRSDKIEEKARVSTDEAIGSRNEDNRLSLGVSDEEARVSPMELDLKDF
RVSENNRSEEVRESNANSADRRIGDESRVFDVNDRVEQNDMINDDENDRIENSEKLEKDT
GSDYKSLLSEFDDYVANDRIGGGTSRALSYGFEVGDMVWGKVKSHPWWPGHIFNEAFASS
SVRRTRREGHVLVAFFGDSSYGWFDPAELVPFDRHFMEKSQQTNSRTFVKAVEEAMDEAS
RRRGLGLACKCRNPYNFRPTNVQGYFVVDVPDYEPNGVYSVNQIRNARNSFKPSETLSFV
KQLASDTGAFDQQSIEFLKNKATVCSFRKAVFEEYDETYAQAFGVRPSRPSNSAVDAPTR
PSKEAPRAPLSGPLVIAEALGGGKSSKKPVKAKDHSKKDRYLFKRRDEAASPTMPSTFRE
GSPTFVAGDYVLQKRAPVSQIPVKQEQTVVMSKDGVSSSGDLSGNAVPSANQTSAPAAAI
DEKPSLNKSDGVSATFQSEGDVIFDPKSEGGKLSRSYEVVQKPDMDSTAKLEGGQGLDQV
RDGLTSGHPYPVDIKRPGGMTAEGGVKKVKKRSSADIGVENSASVKKKKKKKKETGSETN
SDKPKKPSLLGKDGAKSAQIGLGPREESQANQQKKDVDPTYSSFNSVGASTTIGVGNSGF
ELAQLLSDLHALALDPFHGVERNSPTIVRQCFLRYRSLVYQKSLVVLPTSEMDSTELRAG
KPPLVGGSDNTKENVRDSTPSNPVRPLARPDDPTKAGLKRLPSDRLEEIAAKRLKKLSQL
KSLAAEKKGNLRASEAPKVEVKEQPTTGLPARPPKKPDSARKVESLPRAVEPTMLVMKFP
PQVSLPSVAELKARFGRFGSLDQSAIRVFWKSSTCRVVFRHKIDAQAAYRYANGTNSLFG
NVNVRYHLRSVEAPTAEALDSDKARGDETGSETIRVKDPVVERPAAPVVAHQPLPQTTVQ
LKSCLKKPTSEEAGQASGGNGGRGTARVKFMLGGEETSRGDQLMVGNRNNFNNNPCFGDT
AAPSVAMEFNTKNIQKVIPQSSSSFPINPPIPQFGKAPTEVAPRNVHNLNTQTTTLPASS
TTSMDISQQMLSLLTKCNDVVTNITSMLGYVPYHPL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgttgtgaacgacgatgctgaatttgataaacgatcggataaaatcgaagag
aaagctagggtttctaccgatgaagctattggtagccgtaatgaagacaatagattgagc
ttaggagtttctgatgaagaagctagggtttctccaatggagctcgatttgaaagatttt
agggtttcagagaataatagatctgaggaggttagggagagtaatgccaatagtgcagat
agaagaataggcgacgaatctagggtttttgatgtaaatgatcgagtggaacagaatgat
atgataaacgacgatgagaatgatagaatagagaattcagagaagctggagaaggatacg
ggttcagactataagtccttgttatctgagttcgatgattatgtagccaatgatagaatt
ggtggagggacttcaagggcgttgagttatgggtttgaagtgggtgatatggtttgggga
aaggtgaaatctcatccttggtggcctgggcatatatttaacgaagcatttgcatcttca
tctgtacggcggacaaggagagagggacatgtgttagttgcgttctttggggatagtagt
tatggatggttcgacccagctgagcttgtcccttttgatcgtcattttatggagaaatcg
cagcagacaaactcgaggacttttgtcaaggctgtggaagaggcaatggatgaggcaagt
cggaggcgtggtcttggtttggcttgtaaatgtaggaacccatataattttcggcccaca
aatgtccaagggtactttgtagttgatgtgcctgattatgaaccaaatggggtttattca
gtgaatcagattaggaatgcaagaaatagttttaagcctagtgagaccctttcatttgtg
aaacaattggcatcagacactggagcttttgaccagcaaagcattgagtttcttaagaat
aaggctactgtttgttctttccggaaggctgtgtttgaggagtatgatgagacgtatgca
caggcttttggggtgcggccatcacgcccttctaattcggctgttgatgctccaacacga
ccttctaaagaggcaccgcgagctcctttgagtggaccactggtgatcgcagaagcctta
ggtggtgggaagagttctaaaaaacctgtaaaagctaaggaccattcaaagaaagacaga
tacctattcaaacgaagagacgaagcagctagtccaacaatgccatcaactttcagagag
ggatcaccaacatttgtagctggagattatgtgttgcagaagagggctccagtttctcag
attccagtaaaacaagagcagactgttgttatgagcaaggatggtgtaagttcaagtgga
gatttatctggaaatgcagttccatctgcaaaccagacttcagcccccgctgctgctata
gatgaaaagccgtctttgaataaaagtgatggtgtgtctgcaacttttcagtccgaaggt
gatgttatatttgacccaaaatctgagggtggaaaattgtccagatcatatgaagtagtt
cagaaacctgatatggattccactgcaaaactggaaggaggccagggattagatcaagtt
cgagatggtcttaccagtgggcatccttacccagttgatataaagcgccctggtggcatg
actgctgagggtggggtgaagaaagtgaaaaagcgctcctcagctgatataggtgttgag
aactctgcttcggtgaaaaagaagaagaaaaagaagaaagagactggttcagaaacaaac
tctgataaaccaaagaagccttctctccttggaaaagatggggccaaatccgcacagatt
ggtttgggtcctagagaagagtctcaggcgaatcagcagaagaaagatgttgatcctacc
tattcctcattcaattctgttggggcttccacaaccattggtgtgggaaattctggattt
gaacttgcacaactactgagtgatttgcatgctctggctcttgatccctttcatggtgtg
gaaaggaatagcccaacaatcgttaggcaatgctttttgcgataccggtcacttgtttat
cagaaaagtttggttgtgttaccaacatcagagatggattctactgagcttcgtgctggt
aaacctcctttggttggaggctctgacaacaccaaggagaatgttagagactcgactcct
tcaaatccagtgagaccccttgcaagacctgatgatccaacaaaagctggactgaagcgt
ctcccatctgatcgtctagaagaaattgctgcaaagaggttgaaaaaacttagtcagttg
aaatcattagctgcagagaagaagggcaatctgagggcttcggaagctccaaaagttgaa
gttaaagaacagccaactacagggctcccagcaagaccacctaaaaaaccagattctgca
aggaaagtggagtctctacctagggctgttgagcctacaatgctggttatgaagtttcct
cctcaggtatcacttccatcagttgcagaattgaaggcaagatttggacgcttcggctca
ttagatcagtcagctatccgtgtgttttggaagtcctcaacatgccgtgttgtcttcaga
cacaagattgatgctcaggctgcatatagatatgctaatggaaccaactccctatttggc
aatgtgaacgtgagataccatcttcgaagtgtggaagctcctacagctgaagcactagat
tctgacaaggcacgaggagacgagactggcagtgaaaccatacgagttaaggatcctgtg
gttgaaagaccagcagcaccggtggttgcacaccagccacttccacaaacgacggtccag
ctgaagtcctgcttgaagaaaccaacaagtgaagaggcagggcaggcaagtgggggtaat
ggaggtagaggtacagcgcgtgtaaaattcatgttgggtggggaagaaactagtagggga
gatcaattgatggttggtaatagaaacaacttcaacaacaatccctgttttggtgatact
gctgcaccttctgttgcaatggaatttaatactaagaacattcaaaaggtcattcctcaa
tcttcgtcttcgtttcctattaatccccctattcctcaatttgggaaagcccccaccgaa
gtggctcccagaaatgttcacaatcttaatactcaaaccaccaccctaccagctagtagt
acaacaagcatggatatttcacagcagatgctaagcctcttgacaaagtgcaacgatgtc
gtaacaaacataacgagcatgttgggctatgtgccttatcatcctctttga
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