Gossypium hirsutum (upland cotton): 107957617
Help
Entry
107957617 CDS
T04793
Name
(RefSeq) probable alpha-amylase 2
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107957617
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
107957617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
107957617
NCBI-ProteinID:
XP_016748651
UniProt:
A0A1U8PBT1
LinkDB
All DBs
Position
A05:complement(28186804..28190861)
Genome browser
AA seq
410 aa
AA seq
DB search
MGNTNNGPEESTDLGAVLRNGREILLQGFNWESHKYDWWRNLERKVPDIAKSGFTSVWLP
PASNSFSPEGYLPQNLYSLNSSYGSEQLLKALLQKLKQYKVRSMADIVINHRIGTTKGHG
GMYNRYDGIPLAWNEHAVTSCTGGLGNRSTGDNFHGVPNIDHSQHFVRKDIIGWLKWLRS
VGFQDFRFDFARGYSAKYVKEYIEGAKPIFSVGEYWDSCNYNGHGLDYNQDSHRQRIVNW
IDATGQLSAAFDFTTKGILQEAVKGQFWRLRDPQGKPPGVMGWWPSRAVTFIDNHDTGST
QAHWPFPSNHIMEGYAYILTHPGIPTVFYDHFYDWGNSIHEQIVKLMDIRRRQDIHSRSS
VRILESQHNLYSAIIAEKVCMKIGDGSWCPTGREWALATSGHRYAVWQKQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacaccaataacggtccggaggaaagcactgatcttggtgcagtgttgcgaaat
ggaagagaaatccttttgcagggttttaactgggagtctcacaaatatgactggtggaga
aacttagaaaggaaagttcctgacattgccaaatctgggtttacatctgtatggttgcca
ccagcatctaactccttttcacctgaagggtaccttccccaaaacctttattcactcaac
tcttcatatgggtctgagcagttgttgaaagcattactccaaaaactaaagcagtacaaa
gttagatcaatggctgacatagtaatcaatcatcgtattggaactactaaaggccatgga
ggaatgtataaccgttatgatggaattccacttgcgtggaatgaacatgctgtcacatct
tgtactggtggactgggtaacagaagcactggagacaacttccatggggttccaaatatt
gatcacagccaacattttgttcgtaaggacatcatagggtggttgaagtggttacgtagt
gttggcttccaagattttcgctttgattttgcaaggggttactcagcaaaatatgtcaaa
gaatacattgaaggagcaaagcctatattttctgtcggagaatattgggattcttgcaac
tataatggacatggattagactataaccaagatagccatagacaaaggatcgttaattgg
attgatgccacgggacagctctcggctgcatttgacttcacaaccaaggggattcttcag
gaagctgtaaaagggcagttctggcgtctgcgtgaccctcaaggaaagccaccaggtgta
atggggtggtggccctcaagggctgtcacatttatcgataaccatgacacaggctcaaca
caggctcattggcctttcccctcaaatcatattatggagggttatgcatacatacttaca
catccaggaataccaacagttttttacgaccacttttatgactggggcaattccattcac
gaacaaattgtcaaattgatggacattcgaaggcgtcaagatattcacagccggtcatct
gtcagaattctggagtcccaacacaacctgtattctgcaattattgcagaaaaagtatgc
atgaagattggggatggttcatggtgtccaactggcagagagtgggcacttgcaaccagc
ggacatagatatgcagtgtggcaaaagcaatga
DBGET
integrated database retrieval system
