KEGG   Gossypium hirsutum (upland cotton): 107957709
Entry
107957709         CDS       T04793                                 
Name
(RefSeq) F-box protein SKP2A isoform X1
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107957709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107957709
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107957709
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_Zer-1 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 107957709
NCBI-ProteinID: XP_016748757
UniProt: A0A1U8PC34
LinkDB
Position
A05:25226194..25230617
AA seq 372 aa
MISKAKVGSEELNSSFEKLLMVAAGNSGVRVRMEGAVITDWKDIPMELLLRIVSLVDDRT
AIVASGVCCGWRDAICFGLTQLSLSWCKKNMNNLVLSLAPKFTRLQTLILRQENPQLEDN
AVEAIANFCHDIQELDLSKSFKLSDHSLYALARGCPNITKLNISGCTSFSDGALEYLTNF
CQKLKILNLCGCVKAATDRALQAIGRNCKRLQSLNLGWCDNVGDIGVMSLAYGCPDLKCL
DLCGCVRITDDSVIALADKCLHLRSLDLYYCRNITDRAMYSLAHSRVNNKPSLWQSMKGR
YDEEGLRSLNISQCTALTPSAVQTLCDTFPALHTCSGRHTLVMSGCLSLTSVHCACAVQA
HRTLNTIPHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgataagcaaagcaaaggtgggaagtgaagagttgaactcgagctttgagaagctgctg
atggttgctgctggaaatagtggcgtgcgagttaggatggagggagcggtgatcaccgac
tggaaagatattccaatggagctgctgttgagaattgtgtctcttgtcgatgatcggact
gctattgttgcttccggtgtttgttgtgggtggagggatgctatttgcttcggcctcaca
caactcagtctctcatggtgcaaaaagaacatgaacaacttggttctatctcttgctcct
aaattcaccagattgcaaactctaatactgcgtcaagagaatccgcagcttgaggacaat
gctgttgaggctattgcaaacttttgtcatgatatacaggagctggacctaagtaaaagt
ttcaagcttagtgatcactctttgtatgcattggcccgtggttgtcctaacattacgaag
cttaatatcagtggctgcacatctttcagtgatggagctcttgaatatttgactaacttt
tgtcaaaaactaaaaatattaaatctctgtggatgtgttaaagctgcaactgaccgtgcg
ttgcaggctattggacgaaactgcaaaaggttgcaatctttaaatctgggatggtgtgat
aatgttggtgatataggagtgatgagtctagcttatggatgccctgatctcaaatgcctg
gacttgtgcggctgtgttcgcataacagatgatagtgtcattgcgttggcagataagtgc
ctccatttaaggtcactcgatctgtactattgtcgaaatatcacagacagggcgatgtac
tcgctggctcacagccgagtgaataacaagccttcgttgtggcagtccatgaagggtaga
tatgatgaggaaggtcttagaagtctgaatataagccagtgtactgcactgactccttca
gccgtacagacattatgcgatacgtttccagcccttcacacttgctccggaaggcatacc
cttgtcatgagtggctgcttgagcttaacatcagtgcattgtgcttgtgcggtccaagct
catcggacactcaacactattccccatactgctcattga

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