Gossypium hirsutum (upland cotton): 107957908
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Entry
107957908 CDS
T04793
Name
(RefSeq) protein NPGR1
KO
K21843
tetratricopeptide repeat protein 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107957908
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
107957908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_19
TPR_1
TPR_CcmH_CycH
TPR_12
ARM_TT21_C
TPR_11
TPR_8
ANAPC3
TPR_17
TPR_9
TPR_4
Motif
Other DBs
NCBI-GeneID:
107957908
NCBI-ProteinID:
XP_016749020
UniProt:
A0A1U8PD05
LinkDB
All DBs
Position
D05:19059804..19063423
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AA seq
712 aa
AA seq
DB search
MLCACSGEQFKFEDAPQSPESLATRDFSASGLSSRTGDWESKLEDVQVDEVESTLKEALS
LNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTPRMTTAIVERTRLRKSRSKADIIP
HTVMSMHSVSLLLEAIFLKAKSLEELGHIKEAAKECNLILDVVEAALPNGMHEGIAEDCK
LQEMFHRALELLPNLWIKIGYLKEAITAYRRALVKPWHLDSQRLASVQKNLAAILLYGGV
ETSLPPPLRVWGLTTPNCIEEAILLLLALMQKVAFGEIKWDAEIMDHLTFALSVSGHFEL
LAAHVEQVSPGIYERAERWYFLALCYAAAGQNEVALNLLKKVSSQSEAKREPDILALQLG
AYISSQDPKHAHDGITFARYVIDLEDEMNGHFKAQAHKFLGICYGNAARISISDSERAPF
QKESLTSLNYAAFNMKEDPEVMFNLSLENAVQRNLDLAFDNAMKYSSLVAENSGRGWKLL
ALILSADRRFKDAETILEFALDEASGSDQLELLRLKAVLQIAQERPKQAIETYSILLSLI
QAQREAQSNNSGHAKSSHTENIAERNMEMAAWQDLATVYTKFGSWPDAEICLNKAKSIDF
YSPKSWHTTGLLFEAQSLYKEALVSFSVSLSIEPDYVPSIVSTAAVLIKLDGQSLPVARS
FLMNALRLDPTNHDAWMNLGLIAKMEGSLQLAADYFQAAYELKLSAPVEAFT
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtgcttgttcaggtgaacagttcaagtttgaagatgctccacagtctccggag
tctttagcaaccagagatttctcagccagtgggctgtcgtctcggaccggagattgggaa
tccaagctcgaggatgttcaagtggatgaagttgaatccactctcaaagaagctctctcc
ttaaactacgaggaagcaagggcactgttggggaggctagagtatcaaagagggaatttc
gatgctgcgcttcaggtttttcagggtattgacatcaaaggtttgacaccaaggatgact
acggctattgttgagaggacccggctacgcaaatcacggtccaaagctgacattatccct
catactgtgatgtcgatgcactcagtgagcttacttctggaagccattttcttgaaagca
aaatcgttggaggaacttgggcatattaaagaggctgcaaaggagtgcaacctaatttta
gatgtagttgaggcggcactgcctaatggaatgcatgagggaattgctgaagattgcaag
ttacaagaaatgtttcacagagcattagaactgctccctaatctatggattaagataggc
tatctcaaggaagctataactgcgtatcgtcgggctttagtcaagccatggcatttggat
tcccagaggttagcaagtgtacaaaaaaacttagctgccatactactttatggcggtgtt
gaaaccagcctcccacctcctttacgtgtatggggcttaactacccctaattgtattgag
gaagcaattcttctccttctagcactaatgcaaaaagtggcatttggagaaataaagtgg
gatgcagaaattatggatcatctcacctttgctctctcagtttctgggcacttcgagtta
cttgcagctcatgtggagcaggtctctccgggcatatatgaaagagctgagaggtggtac
tttcttgctctttgttatgctgctgctggtcagaatgaagtggcattgaacttattaaag
aaggtttccagtcagtctgaagcaaagcgcgagcctgatatccttgctttacagcttggt
gcttatatatcttcgcaagatccgaagcatgctcatgatggaataacatttgctcgttat
gtgattgacttggaagatgaaatgaatggacatttcaaggctcaagcccataagttcctt
ggcatttgctatgggaatgctgctagaatttccatatcagattctgaaagagctcctttc
cagaaagaatctttgacctctcttaactatgctgctttcaacatgaaggaagatcctgaa
gtgatgtttaacctcagtttggaaaatgcagttcagaggaatttagatttggcctttgac
aatgcaatgaagtactctagcctggtggctgaaaactcaggaagaggttggaagctatta
gcattaatactttctgcagacaggcggttcaaagatgctgaaaccatacttgagttcgct
ttagatgaagccagtggatcagatcaattagaacttctaagactgaaagctgtgcttcag
attgctcaggaacggcccaagcaagcaattgaaacttacagcatcttgctatctctgatt
caagcacaaagagaagctcagtctaataactctggtcatgcaaagagttcccatacagag
aatatagctgaaagaaatatggaaatggcggcctggcaggatctagctactgtttacacc
aagtttggttcgtggcccgatgcagaaatttgtttaaacaaagccaagtcaattgatttt
tattcacccaaaagttggcatacaacaggtttgttatttgaagcccaatcactttataaa
gaggccctggtatcattctcagtctcactgtctatagaaccagattacgtgcccagcatt
gtttcaactgcggcggtactcataaaactggatggtcaatcactcccagttgcaagaagc
tttctaatgaatgctcttcggttagatcctacaaatcatgatgcctggatgaaccttgga
ttgattgccaaaatggaaggctcattacaactagcagcagactattttcaagcagcctat
gagttgaagctatcagcacctgttgaagccttcacatga
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