KEGG   Gossypium hirsutum (upland cotton): 107957940
Entry
107957940         CDS       T04793                                 
Name
(RefSeq) cyclin-T1-3
  KO
K15188  cyclin T
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107957940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107957940
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     107957940
    Brd4/P-TEFb complex
     107957940
    7SK RNP complex
     107957940
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB
Other DBs
NCBI-GeneID: 107957940
NCBI-ProteinID: XP_016749058
UniProt: A0A1U8PFK1
LinkDB
Position
A05:18914134..18917655
AA seq 478 aa
MDSTCAASMCLPEQLHSSMRKWYFSQEEIENHSPARKDGIDLGREEQLRKSYCSFLQELG
MKLKVPQVAIACAMMLCHRFYMRQSHAKNDWQAIATVSTFLACKIEETPRLLRDVIVVGY
EIIYKRDPSAPGRIRQREVYDKQKELILTGERLLLATIAFDLDVELPYKPLVAAVKRLEI
FPNLLKVAWNFVNDWLRTTMCLQYKPHYIAAGSMCLAAKFQKVKLPMEKGKVWWLEFDIS
PKQLQEVTQQMVRLLEQDKRRALSSRHERASQSASLAGNTMTQSCTSSASAGTQSGAGAE
SSKVSKSMDNCAGLDCVKEVFPHQKSDDGASGVVEDGSGTGQPRTEESDQNQSFKIVSSV
ACDNKQASAKESLPSQTSDSGASTVVDNAEGDCDELRTEESHHLNPSIKIVSVCNTFSKS
DADRIREIFKRRRCDRAANLKRMKVRDDEVDSEAWIERELEMGIELESAASRKRGRVH
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggattcaacatgtgcagctagcatgtgtttaccagagcagttgcattcatctatgcgc
aagtggtacttcagccaagaagaaattgagaaccattctccagctaggaaggacggaatc
gaccttggaagagaggagcagttgcggaagtcgtattgttcttttcttcaagagcttgga
atgaagcttaaagtgcctcaggtagcaatagcatgtgcaatgatgctgtgtcaccgattt
tacatgcgccaatcccatgcaaagaatgattggcaggccattgcaactgtaagcacattt
cttgcatgcaaaatagaggaaacaccacgcttgctgcgggatgttattgttgtgggctat
gaaattatctataaacgggatccttctgctccaggaagaatcagacaaagagaagtttat
gataagcagaaggaattgatcttgactggggagaggcttttgttggcaacgattgctttc
gatcttgatgtcgaactcccttacaagccccttgttgcagctgtgaagagattggaaatt
tttccgaacctcttaaaagtggcatggaatttcgtgaatgattggcttcgtacaaccatg
tgcttgcaatacaaaccccattacattgcagctggttccatgtgtcttgctgctaaattt
caaaaagttaagcttccaatggagaagggaaaagtatggtggttggaattcgatatttca
cctaaacagttacaagaggtcactcagcagatggtcaggttgttagagcaagacaaaaga
cgagctttatcgtcaagacatgagagggctagtcaatctgcttctttagctgggaacaca
atgacgcaatcatgcacttcgagtgcatcagctggtactcagtctggtgctggagctgag
agtagtaaagttagcaaatcaatggacaactgtgccggcctagattgtgtgaaagaagtt
ttcccacatcaaaaaagtgatgatggcgcaagtggtgttgttgaggatggcagtggtacg
ggtcagccaagaacagaggaatctgaccagaaccaaagttttaagattgtttcatctgtt
gcctgtgacaacaagcaagcaagtgcaaaagaaagtttaccaagtcaaaccagtgatagt
ggtgcaagtactgttgtcgacaatgctgaaggtgattgtgatgagctaagaacagaggaa
tctcatcatctaaacccaagtattaagattgtatcagtttgtaatacttttagtaagagc
gacgccgaccggattcgagagatctttaagaggaggagatgtgatagggctgcaaatttg
aagcgaatgaaagttagagatgacgaggtagacagtgaagcctggatagagagagaactg
gagatgggaatagaactggaatctgccgcttcccggaagcgagggagggtgcactga

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