Gossypium hirsutum (upland cotton): 107957972
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Entry
107957972 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107957972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107957972
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107957972
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_3
zf-CCHC_2
CLIP1_ZNF
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107957972
NCBI-ProteinID:
XP_016733723
UniProt:
A0A1U8PD74
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Position
A01:complement(118287817..118290783)
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AA seq
284 aa
AA seq
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MRRYDDRYCHTRLYVGRISSRTRTRDLERLFSRYGRILDVDMKRDYAFVDFSDPRDADDA
RYSLDGRDFDGSRIVVEFARGVPRGSREYLGRGPPPGSGRCFSCGVDGHWARDCKAEDSK
NKCYRCGERGHIERNCRNSPRKLRSRSPIRFRSPRRGRSRGRSYSRGLSYSRSRSPVRRE
HSFRLESPEAENSPSLSKGSIHSPSPRNGKLSALQDEADYDDHSPKEVNRSPASPYRDES
PDRSQYRSSSDGNGRSRSPSVRENNSPVDVEYDYPLTPRGSESP
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctatgatgatcgttattgtcatactcgtctctatgttggccgtatctcctca
agaacccgaacacgtgatctagaacgtctctttagccgatatgggagaatacttgatgtg
gatatgaagcgtgactatgcctttgttgactttagcgatccccgagatgctgatgatgca
aggtatagcttggatggtcgggactttgatggaagccgtattgttgttgagtttgcaagg
ggggtgccacgaggttctcgggaatatctaggaagaggcccccctcctggatctggtcgc
tgctttagttgtggtgttgatggccattgggcccgagattgtaaagctgaggactcgaag
aacaaatgttatcgttgtggagaaagaggtcacatagaacgaaactgcaggaacagtccc
cgaaaactgagatctcgttcacctattagatttcgctcacctcgccgtggcagaagccgg
ggtcgaagttacagccgaggcctgagctactctcgttcaagatctccagttaggagagaa
catagtttcagattagagagccctgaggctgagaacagcccatccctctccaaggggagt
attcacagcccttctccccgaaatgggaaattgtctgctctgcaagatgaagccgattat
gatgaccatagtcccaaggaagtgaaccggagccctgccagtccctatagagatgagagc
cctgacagaagccagtaccgaagctcttctgacggcaatggtcgcagccgaagtcccagt
gtgagagaaaacaatagtcctgttgatgtcgaatatgattacccacttacaccgagagga
agcgagtcaccttaa
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