Gossypium hirsutum (upland cotton): 107958032
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Entry
107958032 CDS
T04793
Name
(RefSeq) neutral ceramidase 2
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
Module
ghi_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107958032
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
107958032
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
107958032
NCBI-ProteinID:
XP_016749171
UniProt:
A0A1U8PFW9
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Position
A01:119017958..119022566
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AA seq
779 aa
AA seq
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MKMVCKDCCFMERPVRILGFLFLLLQIEGSLSASNYLIGLGSYDITGPAADVNMMGYANM
EQIASGIHFRLRARTFIVAEPEGNRVVFVNLDACMASQIVTIKVLERLKARYSEVYTEKN
VAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEKSIIQAHENLRPGSILINK
GELLDASINRSPSAYLNNPANERSKYKYNVDKDMTLIKFVDEEWGPIGSFNWFATHGTSM
SRTNSLISGDNKGAAARFMEDWFKQTSFTADYDSLSFNRSVSGRIPRRVSSIIPNFHEKR
KELMELAASFKSSQGRPVTRLLSVARRVRNSLRQADKPQFVSAFCQTNCGDVSPNTLGAF
CIDTGLPCDFNHSTCNGKNELCYGRGPGYPDEFKSTEIIGKKQFKKAVELFDKATEELKG
KVGYQHAYIDFSNLQVSVPKAGGGNEVVKTCPAAMGFGFAAGTTDGPGAFDFRQGDDQGN
AFWKLVRNLLKPPGQEQIDCQKPKPILLDTGEMKLPYDWAPSILPVQIVRMGQLVILSIP
AEFTTMAGRRLRDAVKTVLTSGHNKQFDSNVHIVIAGLTNTYSQYVTTFEEYKVQRYEGA
STLYGPHTLNAYIQEFKKLAAALISGGSVEPGPQPPDLLDKQISLLTPVVLDATPLGVNF
GDVKDDIANSTFKRGNTVSVTFWSACPRNDLMTEGTFALVEILQDQKTWIPAFDDDDFCL
KFKWSRPAKLSPQSYATIDWRIPESVVTGVYRIRHFGASKSLFGSIRHFTGTSSAFVVE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtttgtaaagattgttgttttatggagagaccagttagaattcttgggttc
ttgtttttattactgcaaattgaagggtctttatcagcttccaattatttgattggcctt
ggaagctatgacataactggacctgctgctgatgttaatatgatgggttatgcaaatatg
gaacaaattgcttccggtattcactttagattacgtgctcggacctttatcgttgccgaa
ccggaagggaatcgtgttgtatttgtgaatcttgatgcttgtatggcttcacagattgtt
acaatcaaagtacttgagagattaaaagcaaggtacagcgaggtttatacagaaaagaat
gttgccattagtggcattcatactcatgctggtcctggtggatatcttcaatacgttgtg
tatattgtaacgtctcttggatttgtaagacaatcgtttgatgttatcgttgatggtatt
gagaaaagtattatacaagctcatgaaaatctccgtcctggttcgattttgataaataaa
ggggaactcttggatgccagtataaatcgtagtccgagcgcttatttgaataatccggct
aatgaacggagtaaatataagtataatgtggataaagatatgacattgattaagtttgtt
gatgaagaatggggccctataggtagttttaactggtttgctacccatggaacttctatg
agccgtacgaattcgttgattagcggtgataataaaggtgctgctgctcgatttatggaa
gattggttcaaacagactagttttacagcagattatgatagcctgtctttcaacaggtct
gtaagtgggagaatccctcgaagagtttcgagcatcatccctaattttcacgaaaaacgt
aaggagctgatggaacttgccgcttcatttaaatcttctcaaggacgacccgttactaga
cttttgagtgttgcaagaagggtccggaattccttaaggcaggcagataaacctcagttt
gtatcagcattctgtcaaacaaattgcggtgatgtcagcccgaacacactcggtgcattt
tgcatcgacactggtctgccgtgtgatttcaatcatagtacctgcaatgggaagaatgaa
ctgtgttatggcaggggcccaggctaccctgatgaatttaagagtaccgagattattgga
aaaaagcaattcaagaaagcagtcgaactttttgacaaggcaaccgaagagttgaaagga
aaagtcgggtatcaacatgcctatatagatttctcaaatcttcaggtttcagttcctaaa
gcgggaggaggtaatgaggtggtcaaaacatgccctgctgctatgggatttggttttgct
gcaggtacaactgatggtcccggagctttcgatttcagacaaggagatgatcaggggaat
gccttttggaaattagtgaggaacttactaaagccgccgggtcaggaacagatcgattgt
cagaaacctaagcctattttgcttgataccggtgaaatgaaactaccatatgactgggcg
ccttcgatacttccggtccaaattgtgcggatggggcaacttgtcattctcagcatacct
gcagaattcacaaccatggccggcaggcggctccgagacgctgttaagacggtgcttact
tccggacacaataagcaattcgacagcaatgtccatattgtcattgcagggttgacaaat
acttattcacaatatgttaccacttttgaggagtacaaagtgcagagatacgagggagcc
tcaactctgtatggaccacacacgcttaatgcgtacatacaggagttcaagaaacttgca
gcagctcttatcagtggtggatctgttgaaccaggtccgcaaccacctgatcttcttgat
aagcagattagcttattaacaccggttgtccttgatgcaaccccacttggtgtgaatttc
ggtgatgttaaagacgatatcgctaattccactttcaaacggggcaatacagtctcagtc
accttctggtctgcttgtcctaggaacgacctcatgactgagggcacattcgcattggtc
gaaattctccaagatcaaaagacatggatcccggcatttgacgatgatgatttttgctta
aagttcaagtggtcaagacctgcaaaactgagtcctcaaagttatgcaaccattgactgg
aggataccagaatcagtagtcaccggggtttataggataagacatttcggtgcttcgaaa
tcactttttggttcaatccgacattttacgggtacttcgagtgcctttgtagtggaatag
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