Gossypium hirsutum (upland cotton): 107958060
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Entry
107958060 CDS
T04793
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00750
Vitamin B6 metabolism
ghi01100
Metabolic pathways
ghi01240
Biosynthesis of cofactors
Module
ghi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
107958060
Enzymes [BR:
ghi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
107958060
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
His_biosynth
Motif
Other DBs
NCBI-GeneID:
107958060
NCBI-ProteinID:
XP_016749206
UniProt:
A0A1U8PDE4
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Position
A01:complement(119330066..119337907)
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AA seq
310 aa
AA seq
DB search
MDGTGVVAVYGNGAMTETHNKSTFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVM
ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE
SEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH
VRSVMGDIRVLRNMDDDEVFSFAKKIQSPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL
MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPEVLAEVSCGLGEAMVGINLNDK
NVERFAARSD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatggaactggggttgttgcggtctatggaaatggagcaatgaccgaaactcataac
aaatccactttctcagtgaaagtggggttagcccaaatgcttcgaggaggtgttataatg
gatgttgtcacccctgaacaagctcgtatcgctgaagaagccggagcttgtgccgtaatg
gctcttgaacgagtcccggctgatatccgggcccagggcggtgtggctcgaatgagtgac
ccacaactcattaaggaaattaagcaagctgttactatccctgtcatggctaaggctcgt
attggtcatttcgttgaagcccaaatcctcgaagccattggtattgattatgttgatgaa
agtgaagttcttacacccgccgacgaagagaaccatatcaacaaacataactttaggatc
cctttcgtttgtgggtgtcggaatttaggtgaagcacttcggaggatccgagaaggtgct
gctatgatccgaaccaaaggtgaagctgggactggtaacattatcgaggccgttaggcat
gttaggtccgtgatgggggatattagggtgctaaggaacatggatgatgacgaagttttc
agcttcgcaaagaaaattcaatctccttacgatttggtcatgcagacgaagcagcttggg
aggttaccggtggttcacttcgccgccggaggtgtagcgacgccggctgatgctgcgttg
atgatgcagttgggctgtgatggtgtcttcgtcgggtctggggttttcaagagtggtgac
cctgctagacgtgctcgggctattgttcaagccgtcactcattatagtgacccggaagtc
cttgctgaagttagctgtgggcttggtgaggctatggttggtatcaatttgaatgataag
aatgtcgagcggttcgctgctcggtctgattag
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