Gossypium hirsutum (upland cotton): 107958070
Help
Entry
107958070 CDS
T04793
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107958070
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107958070
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107958070
Protein phosphatases and associated proteins [BR:
ghi01009
]
HAD phosphatases
Fcp/Scp phosphatases
107958070
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107958070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
107958070
NCBI-ProteinID:
XP_016749223
UniProt:
A0A1U8PG18
LinkDB
All DBs
Position
A01:119390932..119398436
Genome browser
AA seq
868 aa
AA seq
DB search
MSRLGFKSMVYHGDFFLGELNTIPITDSNFQFPNNEIRIHHISPTSERCIPLSILHTISS
FPVRCKLESPSPVEQPHLIHLHASCFYEFKTAVVLVGDEEVHLVAMPSKQKKFPCFWCFS
VSTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEVLRGWIARESDPIRHSGM
SAELRRYIDDRLLLKQYAESDCVVDNGKMFKVQMEEVPPLSDGHEKVVRPVIRLQDRNIV
LTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPGA
HLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVPP
FAPYYAPQAETANAVPVLCVARNVACNARGLFFKEFDENVLRKMSEVFYENEVVNLPVAP
DVSNYLMSEEASFASNGNSGAPICEGMNGAEVERRMNQSFIQEEKHVLDSSTRPVTNNPE
LRSETSQPSVTDIVGPGFSVAPLPSQKPSILGAPGLLSNPMMLGASVRRDNNGSEGDYDM
KRRALGIKESLDLRNQSSIQPPLLPKFPIQTSSSSLVPQGGWLVEEDINESHLNDRPSGT
AQESDVIKSDKLRGYQNPFSHTAPGSVSTGLPSYASQVKIEEARTGLDTPKQNVLPTAHL
SEIGGTQNHLPSITRELQSEGAKMNLLPSHLSIGVLQEIGRRCGSKVEFRSVVSTSKDLQ
FSVEVLFTGEKIGVGMGKTRRDAQQQAAELALHNLAEKYVAYIAPRSGAVDRDFNNLSLG
TENGFLWDVNPASNEAIKEGFPKDNTSEAAEEPGSNSSTIANQPVEKRANSPRLSESMPS
KRSKEGVLRRLGSSLSSSRQSKNEHTIS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattagggtttaaatccatggtgtatcatggagacttttttttgggtgaactg
aacactatccctatcacggactcgaatttccagttcccgaataacgaaattcgtatccac
cacatctcccctaccagcgaacgatgcattcctctttcgattctccacacgatttcctca
tttcccgttcgttgcaagctcgaatccccttctcccgtagaacagccgcatttgattcat
cttcacgcctcttgcttttacgaattcaagacggcggtggttttggttggagatgaagag
gtgcacttagtggcaatgccgagtaaacagaagaagtttccttgtttttggtgcttttcg
gtttctacgggactgtacaattcttgcttagggatgcttaacttgaggtgtctcgcgatt
gttttcgatctcgatgaaacgttgattgttgccaacacgatgaagtcgtttgaggatagg
atcgaagtgcttaggggttggattgcgcgggagagtgatccgattcgtcattcagggatg
tcggctgaattgagaaggtatatagatgatcggttgctgttgaagcagtacgcggagagt
gattgtgttgttgataatggaaaaatgtttaaagttcagatggaagaggttccacctttg
tctgatggccatgagaaagttgttcggcctgtgattaggttgcaagacagaaatattgtc
cttactcgtatcaatcctgagattcgggataccagtgtgctggtgaggttacgaccagcg
tgggaggaattgagaagctatttgactgcgaaaggacgaaagcgctttgaagtatatgtt
tgtactatggctgaaagagattatgcattagagatgtggaggcttcttgatcctggggca
catctgataggttcaaaacaactactggaccgtgttgtttgtgtcaaatctggttccagg
aaatctttgctaaatgtgttccgtgatggcaagtgccatccacagatggcaatggtaatt
gatgatcgttcaaaggtctgggaggataaggatcaacctcgagttcatgtagttcctcca
tttgctccgtattatgctcctcaggcggagacagcaaatgcagttccagtcctctgtgtg
gcaagaaatgttgcatgcaatgccaggggtttgtttttcaaagagtttgatgagaatgta
ttacggaagatgtctgaagttttttatgaaaatgaggtggtaaatctgcctgttgcccct
gatgtgagcaactatttgatgtcagaggaagctagttttgcttcaaatgggaacagtgga
gctcctatctgtgaaggaatgaatggagctgaagttgagcggaggatgaatcagtcgttt
attcaggaggagaagcatgttttggactcttccactcgtccagttacaaataaccctgag
ttgcggtctgaaacctctcagccatctgttacagatattgttggtcctggattttcagta
gcaccattgccttctcagaaacctagtatacttggagctcctggtctgctttcaaatcct
atgatgcttggagcttctgtaagaagagataacaatggtagtgaaggtgattatgacatg
aagagaagagcccttggcataaaagagagtttagacttaaggaatcagagctcgatccaa
cctccactcctacctaaatttccgatacagacatcatcatcatcactagtgcctcaggga
ggttggttggtggaagaagacatcaatgaatcacatctaaatgatcgaccatcaggcacc
gcacaagaatctgatgtaataaaatctgataaattgcgaggttatcagaatccgttttct
catacagcacctggttctgtttccactggtttaccatcgtatgcatcccaagtgaagatt
gaagaggcacgtactggactggatacaccaaagcagaatgttctgcctactgctcattta
tcagagataggtggaactcagaatcatctgccttctattactagagaattgcagtctgaa
ggtgcaaaaatgaatcttctaccctcccatttgtcgataggtgttctacaagaaattgga
cgaagatgtggttcaaaggttgagttcaggtctgtggtaagcaccagtaaggatttgcag
ttttctgttgaggttttattcactggggagaagattggtgttggaatgggtaagacaagg
agggatgctcagcagcaagctgctgagcttgcgcttcataatttagcagaaaaatatgta
gcatatatagcgcctcgttcgggagctgtggatagagatttcaataatctctctcttgga
actgaaaatggatttctatgggacgtgaatcctgcatccaatgaagcaataaaagaaggg
tttcctaaagataatacttctgaggctgctgaagaacctgggagtaattcatccactata
gcaaatcaaccagttgaaaaacgtgccaattcaccaagattgtccgaatctatgccgagc
aaacggtcaaaggaaggagttctgcgaagattaggaagtagtctatcatcctcacggcaa
tcaaaaaatgagcataccatttcatga
DBGET
integrated database retrieval system
