Gossypium hirsutum (upland cotton): 107958116
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Entry
107958116 CDS
T04793
Name
(RefSeq) alpha-amylase-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107958116
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
107958116
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GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
107958116
NCBI-ProteinID:
XP_016749279
UniProt:
A0A1U8PGE8
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Position
A05:complement(20327471..20329853)
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AA seq
435 aa
AA seq
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MRLRERNIYIYIKIQRMSCVTSLCFLSLFLYIFPSLTSPSLLFQGFNWESCNKAGGWYNS
LKNSIPDIANAGVTHVWLPPPSQSVGPQGYLPGRLYDLDASKYGSQAELKSLIKAFHQKG
IKCLADIVINHRTAERKDGRGIYCIFEGGTPDDRLDWGPSFICGNDKEYSDGTGNPDTGL
DYPPAPDIDHLNPRVQKELSDWMNWLKTEIGFDGWRFDFVRGYAPSITKIYMERTSPDFA
VGEKWEDLSLGQDSQDAHRGALKDWVEAAGGVVKAFDFTTKGVLNAAVQGELWRLKDSNG
EPPGMIGLLPQKAVTFIDNHDTGSTQKLWPFPSDKVIQGYAYILTHPGTPSIFYDHFVDW
GLKDEITKLATIRRKNGISETSKVDILASDSDLYVAAIDEKIITKIGPKMDLGNLVPSNY
QLATSGKDYAVWAKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaggctaagagaacgaaacatatatatatatataaaaatacagagaatgagttgtgta
acttcactttgcttcctttctcttttcctctatatctttccatctttgacgtctccaagc
ttgctattccagggtttcaactgggagtcgtgtaataaggctggaggatggtataactct
ctcaagaactccatccctgatatcgctaatgctggtgttactcatgtctggcttcctcca
ccctctcaatcagttggaccccaaggatatctgccaggaaggctatatgatcttgatgca
tcgaagtatggatctcaggctgaattgaagtcactaataaaagctttccatcagaaggga
ataaaatgtttagctgacatagtaataaaccatagaacagcagagaggaaagatggaaga
ggaatatactgcattttcgaaggaggaactccagatgatcgattagattggggaccatct
ttcatttgtgggaacgataaggagtattcagatgggacaggcaatcccgacactggactg
gattatccaccagctcccgacattgaccatctcaacccaagggttcaaaaagagttgtct
gactggatgaattggttaaagaccgaaattggttttgatggatggagatttgatttcgtg
agagggtatgccccaagcatcaccaaaatctatatggaacgaacttcaccagattttgct
gttggggagaaatgggaagatctttccttggggcaggatagtcaagatgcacaccgtgga
gctctcaaagattgggttgaagctgccggtggggttgtcaaagcattcgatttcaccacg
aaaggggttctgaatgctgcagtgcaaggggagttgtggcggttgaaggattccaatggg
gaacctcctggaatgattggacttttgccccaaaaggcagtgactttcatcgataatcat
gacacagggtctactcaaaagctttggcctttcccatctgataaagtcatccagggctat
gcttatattctcacccatcccggcactccatcaatattctatgatcactttgttgattgg
ggattaaaggatgagattactaaattggcaaccataaggagaaagaatgggatcagtgaa
acaagcaaggttgatattctagcctctgattctgatctgtatgttgccgcaattgatgag
aaaatcattaccaagattggcccaaagatggacctgggcaaccttgtaccttccaactac
cagcttgctacctcagggaaagactacgccgtgtgggcaaagaagtga
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