Gossypium hirsutum (upland cotton): 107958149
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Entry
107958149 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107958149
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107958149
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107958149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-Nse
PHD
Prok-RING_4
zinc_ribbon_16
Prok-RING_1
Baculo_RING
RINGv
Motif
Other DBs
NCBI-GeneID:
107958149
NCBI-ProteinID:
XP_016749325
UniProt:
A0A1U8PDU7
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All DBs
Position
A08:complement(122627775..122629616)
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AA seq
428 aa
AA seq
DB search
MVITSKSRHCIQPKHPRTCFVVCRIFYCLKLGIGFSSKELALVFDVKKTIGFVTIVIFRK
RLEQENGEKYILEIFVLNRGNRRGHTFHLTMSSGGKNGIVSFLFFLLFFSPPPSAAQLTD
SNIGHESYARFTPTMAMIIAGLVVALFFMGFFSIYLRNCSRSGGNGSSVRPVNVGAWRGR
RDEMRGLEASVIETFPTMVYSEVKVHKIGKGALECAVCLNEFEDDETLRLIPKCDHVFHA
ECIDPWLASHVTCPVCRANLATQPGDPVSQLIELDNTVIELNFEAQNNDNDLEITELGDP
VSQPIELDNTVIELDLEAQNNDNNLEIREERGENQNINTITSDVEAQVSLEVKIINVNQI
LNMNYTRKPFFSRSYSTGHSLIQPSENIDRFTLQLPIDVRKQLLNRGKSLVLPKESSLTR
ENNDGSSR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcacgagtaagtccagacattgtatccaaccgaagcatccaagaacttgcttt
gttgtatgtagaatattctattgcctaaaattaggtattggtttttctagtaaagaactt
gcattggtttttgacgttaagaaaactattggattcgtaacaatagttatttttagaaag
aggttagagcaagaaaatggcgaaaaatatatattggaaatttttgtattgaatcgaggc
aaccgccgcggtcatacttttcatctcaccatgtcgtctggcggcaaaaatggaattgtt
tcctttctttttttccttcttttcttctctccgccgccctccgctgctcaactcactgac
tcgaacatagggcatgagtcttatgcccgttttacccctaccatggctatgatcatcgcc
ggtttggttgttgctttgttttttatgggttttttctcgatttatttacggaactgctct
agatctggcgggaatggaagcagcgtccgccctgtcaacgtcggagcctggcgtggccgt
cgtgatgagatgcgtgggcttgaagcatctgtgatcgagactttccccaccatggtttac
tccgaagtgaaagttcataagatcgggaaaggagctttggagtgcgcggtttgtttgaac
gagttcgaagatgacgaaacgctgcgtttaatccccaaatgcgaccacgttttccacgct
gaatgtatcgatccttggttggcttctcatgttacatgccccgtttgtagagctaatctc
gctactcaacctggtgatcctgtgagtcaactcattgagttagataatacagttattgag
ttaaacttcgaggctcaaaataacgacaatgatttagaaataacagaacttggtgatcct
gtgagccaacccattgagttagataatacagtcatcgagttagacctcgaggctcaaaat
aacgacaataatttagaaataagagaagaaaggggggagaatcaaaatatcaatactatt
acttctgacgtggaggctcaagtctccttagaggttaaaataattaacgtgaatcaaatt
ttaaatatgaattacacacgtaaaccctttttctcacgatcgtactcgaccggacactct
ttaatccaaccaagtgaaaacatagatcgatttacattgcaattaccgattgatgttcga
aaacaattattaaatcgaggaaagagtttagtgttgcctaaagaaagttcacttactaga
gaaaacaatgatggaagtagtagatga
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integrated database retrieval system
