Gossypium hirsutum (upland cotton): 107958276
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Entry
107958276 CDS
T04793
Name
(RefSeq) autophagy-related protein 8C-like
KO
K08341
GABA(A) receptor-associated protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107958276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107958276
04121 Ubiquitin system [BR:
ghi04121
]
107958276
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107958276
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107958276
Ubiquitin system [BR:
ghi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
107958276
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107958276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
107958276
NCBI-ProteinID:
XP_016749478
UniProt:
A0A1U8PEA4
LinkDB
All DBs
Position
A05:17041849..17043725
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AA seq
123 aa
AA seq
DB search
MAKSSFKLEHPLERRQDEAARISAKYPDRVPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSAEKAIFVFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGSPS
LKA
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagttcctttaagcttgagcatccattggaaaggaggcaagatgaagctgct
cgcatcagtgctaaatatccagacagagttcctgttattgttgagaaagctgaaaggagt
gacattccggatatcgataaaaagaagtatcttgttcctgctgatttgactgtgggccaa
tttgtttatgttgtacgtaaaaggattaagcttagtgctgagaaagctatatttgtcttt
gtgaagaacactcttcctcctaccgctgccttgatgtctgcaatttatgaggaaaacaag
gacgaagatggttttctttatatgacttacagtggagaaaacacatttggttccccttca
cttaaagcataa
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