Gossypium hirsutum (upland cotton): 107958434
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Entry
107958434 CDS
T04793
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a
KO
K14972
PAX-interacting protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107958434
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
107958434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
Motif
Other DBs
NCBI-GeneID:
107958434
NCBI-ProteinID:
XP_040969330
LinkDB
All DBs
Position
A05:11805269..11816935
Genome browser
AA seq
1340 aa
AA seq
DB search
MDTNNWRPTPPSGEPNMDSGDWRTTLQPDSRQRIVNKIMDTLKRHLPFSGQEGLSELRKI
AVRFEEKIFTAASSQTDYLRRISLKMLTMETKSQNTMPNTGNNSKPPDPGSQGMQNQVHS
QGQSIPIPLQSNQSQARQQLLPQSVPNNMASAGVQSSAGLQPGMPPVSGLSQNPISNVVG
QNSNIQNMSGISQNSMGQGMPSNIFANQQRQMQGRQQVLPQQQQQQQQQQQLYHQQLQQT
LMKQKIQQGNLQPSLLQSHMQQQQQQNLLPPTQLQSSQQSGMQTSSIMQPSAMQSTLPGL
QQNQQSSLQQSTQSMLQQHQQSVLRQQQQPQQTTSAGIHQQQTPMTQQSMMPQQQQHMMG
QQANAANIPQNQLIGQQNSIADMQQQRLLGQSSNLQQQQQQQQLMAQQNNLSNMHQQQLG
PQSNISGLQQQQQQLVGTQSGNSSMQTNQQSLHMLSQPKVALQQTQQTAPNLLPTQGQTS
QQPQQQQQLMSQMQSQPTQLQQQLGLQQQPNQVQQNMQQRLQASGQTSSSLLQSQNLIDQ
QKQLYQSQRAVPETSSTSLDSTAQTGHSNGGDWQEEVYQKIKAMKETYFSELNEMHQKIA
AKLLQHDSLPQQPKSEQLEKLKIFKTMLERILHFLTVSKANIVPAFKDKLSSYEKQIIYF
INTNRPRKPVSALQQGQLPPPHMHSMQQPQPQSNQTQSHDNQMNPQLQSINLQGSMPTMQ
PNNMTSLQHNTLSSLPGVSTAQQTMLNSLQPGSNLDPGQGNALGSMQQVAPGPLQQNPAS
TSQQANLNSLSSQSGLSVLQQNMNPLQSNSNMLQHQHMKQQQEQQILQSQKYKQQLQQQR
QMQHQIMQQKHQLMQQQQQQAKQQLPTQLQAHQMPQLHQMNDVNDMKQGISVKPGVFQQH
LPAGQRQTYTHQQLKPGVQFPISSPQLHPAASPQMPEHSSPQIDQQSLLPSISKTGTPLQ
SANSPFVVPSPSTPLAPSPMPGESEKPAPGTSSLSNAANIGHQQGTGVQAGSQSLAIGTP
GISASPLLAEFTDGTHANVLTTVSSKSNITEQPLERLMKAVKSMSPTALCASVSDIGSVV
SMTDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITQDGMSGSKKMRRHTSAMPLNVV
SSVGSINDSFKQLTGSETSDLESTATSTVKRPRIEANHALLEEIREINQQLIDTVVDISD
EDVDPGTVATAAEGGEGTVVKCSFNAVALSSNLKSQYMSAQMSPIQPLRLLVPTNYPNCS
PVLLDKFPVEVSKEYEDLSVKAKSKFSISLRTLSQPMSLGEIARTWDVCARAIISEHAQQ
SGGASFSSKYGTWENCSMAA
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaataactggaggcctactcctcctagtggagagcccaacatggacagtggt
gattggagaaccactttgcagcctgactcacgacaaagaattgtcaacaagataatggat
acattgaagaggcatcttccattttctgggcaagagggtttaagtgaactcaggaaaatt
gctgtgaggttcgaggaaaagatttttacagctgcaagcagtcagactgattatctgaga
agaatatctttgaagatgcttacaatggagaccaagtctcagaataccatgcccaacact
gggaataacagcaaaccacctgatccaggttctcagggcatgcagaaccaagttcacagt
caaggacaatcaattcctataccattacaaagtaatcagtctcaagcacgtcaacaactg
ttaccccagagtgttccgaataacatggcatctgctggagttcagagttctgctggttta
caacctggaatgcctcctgtatctggtctatctcagaatcctatatctaatgttgttgga
cagaattccaacatccagaacatgtctggaatttcgcagaactcaatggggcaaggaatg
ccttccaatatttttgctaatcagcagaggcaaatgcaaggaaggcagcaggtgcttcct
caacagcagcagcagcagcagcagcagcaacagctatatcatcagcagctgcaacaaaca
cttatgaagcaaaagattcaacaggggaatcttcagccttcactcctgcagtctcacatg
cagcaacagcagcagcaaaacctactaccacctactcagttgcaatcatcccagcaatct
ggtatgcaaacatcatccattatgcagccatcagccatgcaatcaactcttcctggtctt
caacagaatcagcaatcttctctccaacagtcgacacagtccatgcttcagcagcatcaa
cagtcagttcttagacagcagcaacagccacaacagaccaccagtgctggtattcatcaa
caacaaacaccaatgacacagcagtcaatgatgcctcagcagcagcagcacatgatgggg
caacaggcaaatgctgcaaatataccacagaatcagttaattggacaacaaaacagtatt
gcagacatgcagcagcagagactgctaggccagtctagtaatctgcagcaacaacagcag
cagcagcagttaatggctcaacaaaacaacctttcaaatatgcatcagcaacagttgggt
cctcagagtaatatttcaggactacagcaacagcagcagcaattggttggaacccagtcg
ggtaactcaagcatgcaaactaatcaacaatctttacacatgctatcccagcccaaggtt
gcactccaacaaacgcagcagactgcacctaatttactgccaactcaaggacagacatcc
cagcagccacaacagcagcagcaactgatgtctcagatgcaatcacagcctactcagttg
cagcaacagttgggcttgcaacagcagcccaatcaagtgcaacaaaatatgcagcagaga
cttcaagcatcaggtcaaacatcaagttccttgcttcaatcacaaaatttgatagatcag
caaaagcagttgtatcaatcacagagagctgttccggagacatcatcaacatctttagat
tccacagctcaaacaggacattctaatgggggtgattggcaagaagaggtctatcaaaag
atcaaggccatgaaagagacatacttctctgaattaaatgagatgcaccagaaaattgct
gccaagttgctgcagcatgattctcttccacagcagccaaagtcggagcagcttgagaag
ttgaaaatattcaagaccatgttggagcgcattctacatttcttaactgtttccaaagct
aatatagtaccggctttcaaggacaagttgagttcgtatgagaagcagataatatacttt
ataaataccaataggccaaggaagcctgtctcagctctgcagcaaggacagcttcctcca
cctcatatgcattccatgcagcagcctcaacctcaaagtaatcaaacgcaatctcatgat
aatcaaatgaatcctcagttgcagtcaataaatttacaaggttctatgccaacaatgcag
cctaacaacatgacaagcttgcagcataataccttgtcttctttacctggggtttcaaca
gcacagcagaccatgttaaattcgctgcaaccaggttcaaatttggatccaggacaaggt
aatgctctaggctcaatgcagcaggttgcaccaggacctttgcaacagaatcctgcaagt
acctcccaacaggcaaatcttaatagtttgtcatcacaaagtgggttaagtgtcctgcag
caaaatatgaatcctctccagtcaaattccaacatgcttcagcaccagcatatgaaacaa
cagcaggaacagcaaattctgcagtcgcaaaagtacaaacaacagttacaacaacagcgg
cagatgcagcatcagattatgcagcagaagcatcaactaatgcaacagcagcagcagcaa
gcaaagcaacagctgcccactcaattgcaggcacaccagatgccacagctgcatcagatg
aatgatgtaaatgatatgaagcaggggattagcgttaagccaggtgttttccaacagcac
ctcccagctggccagcgacaaacttatacccatcaacagttgaaaccaggtgttcaattt
cctatttcttcacctcaactccatccagctgcatctcctcagatgcctgagcattcttcc
ccacagattgatcagcagagtctgctaccatctatctcaaaaactggaacccctttgcag
tctgcaaactcaccttttgttgttccttcaccttcgactcccttggctccatcacctatg
cctggggaatctgaaaaacctgctccaggcacttcctctctctcaaatgctgcaaatatt
ggacaccaacaaggaactggtgttcaagcaggttctcaatcacttgcaattggcactcct
gggatatctgcctcacctctgctcgcagagttcactgatggaactcatgctaatgttttg
acaactgtttctagcaagtcaaacattaccgagcagcctcttgaacgtttaatgaaggcg
gtgaaatctatgtcgcctactgcattgtgtgcttctgtaagtgatattggctcagttgtc
agcatgactgacaggatagctgggtcagcgccaggtaatgggtctagagctgctgtcggt
gaggatctggttgctatgacaaagtgtcgtctacaagcaagaaatttcatcactcaagat
ggaatgagcggatcaaagaaaatgaggcgccacactagtgccatgcccctaaatgttgta
tcatctgtgggtagcataaatgatagtttcaaacagttaactggttcggagacatctgac
ttggagtcaacggcaacatctactgtcaagaggccaagaattgaggctaatcatgccctt
ttggaagaaataagggaaataaatcaacaacttatagacacagttgttgatatcagtgat
gaagatgttgatccaggtacggtggcaacagctgctgaaggcggtgaaggaaccgttgtc
aagtgctccttcaatgctgtggctcttagttcaaacttgaaatcacagtacatgtcagcc
caaatgtcaccaattcagcccttgcgtctgctagttcccacaaattatccaaattgttcc
cccgtcctattagacaagttcccagttgaagtcagcaaagagtacgaagacctttcagta
aaagcgaagtcaaagtttagtatatcattgcgaaccctttcacagcctatgtcacttggt
gagatagcaaggacatgggatgtttgtgcccgagccattatttctgagcatgcacaacag
agtggtggggccagctttagctcaaaatatgggacttgggagaactgctcgatggctgca
tag
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