Gossypium hirsutum (upland cotton): 107958442
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Entry
107958442 CDS
T04793
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107958442
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107958442
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box
F-box-like
LRR_R13L1-DRL21
LRR_At1g61320_AtMIF1
LRR_6
LRR_At5g56370
LRR_13
F-box_5
Motif
Other DBs
NCBI-GeneID:
107958442
NCBI-ProteinID:
XP_016749703
UniProt:
A0A1U8PHC8
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Position
A05:11764438..11766156
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AA seq
572 aa
AA seq
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MELPEECWESIFSFLERHRYFEPLSLVCKRFLSITNHLRRSLTITDPTLESLPHLLLRFP
NLTTIAFRDFHGNLDSVLSLISQSGLPLTSLDVSCHKCFPLLGLKCLASKIRILTELNCS
NIGSLKDSDLIEIGNCFPSLEVVDISYPDHGCGFSPNGSLDSKSFSGLVTDYGILGLASS
LRRLRKIDLSGNTFITDQALVSLSSNCMFLTEIGIRDCDFITQNGIALAIRKTGNLKSIF
MNGIGIPSIDVCFLGSFSYARSLCELDLSNSFISDELLCLVAEANLPLNKLVLSRCFCFT
FDGIYFLLSKYQSLAYLDLEGANFLNDESIIELAKFFGNLTFINLSLCSKLTNSTLFNLM
GNCPLLTIINMERTNLGVEAFPAAIVVNPRVKSLHLGWNNNLNDECMKMASYVCPNLEVL
DVTYCSGITEEGILEVLKSCVQIRCLEISRCQGVNNLELDFELPKLEVLQAEGLAINDEG
LASIGKRCGRLSRLNLEGCLNVTARGVEGVIVNCKALKEMNLRWCNNVSVDIVAWMVLSR
PSLRKITLPCGSVPTANQRNFFLRHGCLVCQG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccggaagaatgctgggaatcaatattcagtttcttagaacgccatcgctac
ttcgagcctctttctttagtctgcaaaagatttctttccatcaccaatcatctccgtcgc
agtctcaccatcaccgaccctacccttgaatccctccctcatctcctcctccgctttccc
aatctcaccaccatcgcttttcgtgatttccacggcaatctcgattccgttctttccctc
atttctcagtctgggttgcccttgacctccctcgacgtgtcctgccacaagtgtttccct
ttactgggtttgaaatgcttggcttccaaaattaggattttgacggaattgaattgctcc
aacattgggtctttgaaagactctgatttgattgagatcgggaattgttttccttctctt
gaagtggttgacattagctaccctgaccatggatgtgggttttcccctaatgggtcattg
gattccaagagcttttcgggtttggttaccgattatgggatcctcggtttggcctcgtcg
ctcaggagactgcgcaagattgatctttccggtaatacctttataaccgatcaagctctt
gttagtttatcctccaattgtatgtttttgactgaaattgggattcgtgattgcgatttc
attacccagaacgggattgctttggctattcgtaaaactggtaatttgaagtcgattttc
atgaacggaattggaattccttctatagatgtatgttttctgggttctttttcctatgcc
agaagcttatgcgagcttgatctctccaattcgtttatatccgatgaattgttgtgttta
gtagctgaggcaaaccttccgttgaacaaacttgttctctctcgttgcttttgcttcaca
tttgatgggatttattttctcttgtccaagtaccagtcccttgcatacttggatcttgaa
ggagcaaattttctcaatgacgagtccataatagaattagccaagttttttggtaattta
acctttataaaccttagtctatgctctaagcttaccaattcaaccttgttcaatcttatg
ggaaactgtccattgctaacaattatcaatatggagagaacaaacctaggggtggaagca
tttccagctgcaatcgtggtgaatcctcgagtcaagtcgttacatttgggttggaataac
aatttgaatgatgaatgcatgaaaatggcttcctatgtttgccccaatctagaagtactc
gacgttacctattgctcgggtattacggaagagggcatcttggaagttttgaagagttgt
gtgcagattaggtgtttagagatcagtagatgccagggggttaataatcttgaattggac
tttgaacttcctaaactagaggttttgcaggcagaggggttggcaattaacgatgaggga
ttggcttcaatcgggaagcgatgtggtcgcctatcccgtctgaatctggaaggttgcttg
aatgtgactgccagaggagttgaaggcgtgattgtgaactgcaaagcattgaaagagatg
aacttgagatggtgtaacaatgtgagtgtagacattgtagcttggatggtgctttcaagg
ccatctttgaggaagattaccctgccatgtggttctgttcctactgcaaaccagaggaat
tttttccttcgtcatggatgtttagtttgtcaaggctag
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