Gossypium hirsutum (upland cotton): 107958635
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Entry
107958635 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107958635
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107958635
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107958635
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107958635
03036 Chromosome and associated proteins [BR:
ghi03036
]
107958635
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107958635
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107958635
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107958635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
RSA-1_C
Allatotropin-like_C
DUF4187
Motif
Other DBs
NCBI-GeneID:
107958635
NCBI-ProteinID:
XP_016749946
UniProt:
A0A1U8PFE9
LinkDB
All DBs
Position
D07:56446691..56453496
Genome browser
AA seq
545 aa
AA seq
DB search
MSLSLKMEIDPVEDVTCLNPELLQLPEVSPFALKTTPLLVDDLFSQWLSLPETGNLVKSW
INDAKAGTAVNACANFSNVNAVGSNSLPSMFSSVNAPPLSPRSSSGSPRSSKQKSSPSAL
GSPLKLFSDPMQEVIPQFYFQNGCPPTKELKEQSLSKINHLFNNPLNGLLIDEFKTVTKE
VCKLPSFLSSALFRKIDVDCMGIVTRDAFITYWVDGNMLTMDVATQIFEILKRPGHKHLT
QVDFRPILRELLATHPGLKFLQNTPEFQDRYAETVIYRIFYHMKRSGNGRLTLRELKRGE
LISAMQQADEEDDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIRYGNHALTYR
IVDRIFSQAPQKFAGDVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDGNGVLTPN
EMQFFYEEQLRRMECLALEPVLFEDILCQIIDMIAPERENCITLQDLKGSKLSGNVFNIL
FNLNKFMAFETRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDVEDASNGSADVWDES
LEAPF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtctttaaaaatggaaatcgatccagtggaagacgttacttgtttgaaccct
gagcttttgcagcttcctgaagtgtccccatttgcactaaaaaccactcctctacttgtc
gatgacttgttctctcaatggctttcacttccggagactggcaatctggtgaaatcttgg
atcaatgatgcaaaggcagggactgcagtcaatgcctgtgcaaacttttctaatgtaaat
gctgttgggagcaactcattgccttccatgttttccagtgtcaatgcacctccactttct
ccaagaagctcatcgggttctcctcgctcatcaaagcagaaatccagcccttcagctctt
ggctctccattgaaattatttagtgatccaatgcaagaagtcattccacagttttatttc
caaaatggttgtcctcctacaaaggaattgaaagaacaatctctttctaaaattaatcac
cttttcaataatcctctaaatggattgctaatagatgagtttaaaacagtgacaaaggaa
gtttgcaagctaccatctttcctatcttccgcgctttttagaaagatagatgtagactgc
atgggaatagtgaccagagatgctttcattacgtattgggtggatggcaatatgctgaca
atggatgtagccactcaaatatttgaaattcttaagcggccaggccacaagcacctcact
caggttgacttcagacccattcttcgagagcttttggcaacccatccaggattgaaattc
ttgcagaacacacctgaatttcaagatagatacgctgaaactgtcatatacagaatcttt
tatcacatgaagagatcgggaaatggccgtcttaccctcagggagctcaaacgtggagaa
ctgatttctgccatgcaacaagcagacgaggaagatgacattaataaagtccttaggtac
ttctcctatgagcacttctatgttatatactgtaagttctgggagttggacacagaccat
gatttcttcatcgacagagaaaacctcatcagatatggcaatcatgcccttacctacaga
atcgttgatagaattttttcacaggctcctcagaagtttgctggtgatgtagaagggaag
atgggttatgaagactttgtttacttcatgctctcagaggaggacaaatcatctgaacct
agtcttgaatattggttcaagtgcattgatttggatggaaacggtgtgctcactccaaat
gaaatgcaatttttctacgaggagcagctgcgccgaatggaatgcttggccctagaacct
gtgctctttgaggacatattgtgtcaaataattgacatgattgcacccgagagagaaaac
tgtataacattacaggacttaaaagggagcaaactttcaggaaatgtttttaacatcctt
tttaatcttaataagtttatggcatttgaaacccgtgatccattcctcattcggcaggaa
cgagaggatccaactttgacagagtgggatcgctttgcacatagggagtatatcaggctt
tcaatggaagaagatgttgaagatgcctcaaatggaagtgctgatgtatgggatgagtcc
cttgaagcaccattctaa
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