Gossypium hirsutum (upland cotton): 107958648
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Entry
107958648 CDS
T04793
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107958648
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107958648
Meiosis-specific proteins
Cohesin complex and associated proteins
107958648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_29
AAA_21
AAA_15
ABC_tran
Fez1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
107958648
NCBI-ProteinID:
XP_016749959
UniProt:
A0A1U8PIC4
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All DBs
Position
D07:complement(56260084..56274782)
Genome browser
AA seq
1217 aa
AA seq
DB search
MPSLTSPGKILRLELENFKSYKGLQTIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGGQLRDLIYAFDDREKEQRGRRAFVRLVYQLAGGSELCFTRSITSTGGSEYRIDSSV
VNVEEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSESVKNKYEEL
EELKARAEEKSALIYQRKRTIVMERKQKKEQKEEAEKHFRLQDELKSLKKEHYLWQLHNI
EKDIDKITDELDSEKKNREDVMHELEHFEAEAAKKKKEQAKYLKEIAQCEKRISERSIRV
DKSQPELLKLNEEMARINSKIKSNRKELERKKEERRKHGDDIKELQKGIQDLTAKLEALN
EKSRDGTGKLPLLDSQLTEYFQIKEDAGMKTAKLRDEKELLDRQQHTDIEAQKNLEENLQ
QLRNREQELEAQEDQMRTRLKKILDTSAKQKDELAELKKELREMQDRHQKSRSKHENLKS
KIAEIENQLRELKADRHENERDARLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGRFMDAVVVEDENTGKECIKYLKEQRFPPQTFIPLQSVRVKPIIERLRTLGGTAKLIF
DVIQFDPALEKAVLFAVGNTLVCDDLEEAKVLSWTGERFKVVTVDGILLSKSGTMTGGTS
GGMEARSNKWDDKKIEGLKKKKEQFESELEELGSIREMQLKESETSGRISGLEKKIQYAD
IEKKSIEDKLKNLKQEKKNIKDRIGHITPEIQKLKDVSDKRSKDIMKLEKRINEIVDRLF
KSFSQSVGVANIREYEENQLKAAQNMAEERLSLSNQLAKLKYQLEYERKRDVDSRIKKLE
SSISSLENDLKLVHKKEAEVKLATEKASEDINRWKEEVKEWKSKSEDCEKEIQEWKKQAS
AATTSISKLNRQINSKETQINQLDEWKGEIIEKCDLEHIELPLIADPMETESSNGKEFDF
SQLNRSLLQDRRPSDREKLEAEFKQKIDALVSEIERTAPNLKALDQYKTLQEKERDVTEE
FELARKEEKQVADEYNSVKQKRYELFMDAFNHISSNIDRIYKQLTKSGTHPLGGTAYLNL
ENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA
ALDNLNVAKVAGFIRSKSCDGARTSQDSEIGSGFQSIVISLKDSFYDKAEALVGVYRDSE
KSCSRTLTFDLTKYRES
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctttgacttctccaggaaaaatacttcgcctagagcttgagaacttcaagtcc
tataagggtcttcaaactatcggtcccttctccgacttcaccgccattattggaccgaat
ggggcgggcaagtccaatctcatggatgcaatcagcttcgttcttggagtccgaactggt
cagctacgtgggggccaactcagagacctaatatatgctttcgacgaccgtgaaaaggaa
caacgtggccgacgcgcatttgtgcgattagtttaccagcttgccggtggctccgaactc
tgtttcactcgttccatcaccagtactggaggtagcgagtaccgtatcgacagcagtgtt
gtcaacgtggaggagtacaatggaaagttaagatcacttggtattctcgttaaggcccgg
aattttcttgtttttcagggtgatgtcgagtccattgcttcaaaaaatcccaaagaactg
acagggctgctcgagcagatttcgggttctgaatcagtaaagaacaaatatgaggagttg
gaagagctaaaagctagggctgaagaaaaatcagcgcttatttatcaaagaaagaggaca
atagtgatggagagaaagcaaaagaaagaacagaaggaagaagctgaaaagcacttccgc
ttgcaagatgagctgaaatctttgaaaaaggagcattatttgtggcaattgcataatata
gagaaggacattgacaagattactgatgaactagactctgagaaaaagaaccgtgaagat
gtgatgcatgagctagaacattttgaagctgaagcagctaagaagaagaaggaacaggct
aaatacctaaaggagattgctcaatgtgaaaaaaggatctccgagagaagcattagagtt
gataaaagtcaacctgagcttctgaaattaaatgaagaaatggctcgtataaattcaaaa
atcaagagtaaccgaaaggagcttgaaagaaaaaaagaagaaaggaggaaacatggtgat
gatataaaagaattacagaaaggcatacaagatctgactgcaaagttggaagcgttaaat
gaaaaaagtcgcgatggcacagggaaactccctttgcttgatagtcaacttaccgagtat
ttccaaattaaggaggatgctgggatgaaaactgctaagttaagagatgagaaggagctt
cttgataggcaacaacatactgatattgaagctcaaaaaaatttggaagaaaatctccaa
cagttgagaaatagggagcaagagttggaagcacaggaagaccaaatgcgaactagactg
aagaagattcttgatacctctgctaaacagaaggacgagcttgcagaattgaaaaaggaa
ctacgagaaatgcaagatagacaccagaagtccagatctaagcatgagaacctcaagtcc
aaaattgctgaaatagaaaatcagttacgtgagctgaaggctgatcgacatgaaaatgaa
agggatgctaggttgtctcaagctgttgagactctgaaacgcctctttcaaggtgttcat
ggtcgcatgactgatctttgtagaccaacacagaagaagtacaaccttgcagtcactgtt
gccatgggcagatttatggatgctgttgtcgtagaggatgaaaataccggaaaggaatgt
attaagtatttgaaagagcaaaggtttcctcctcagactttcattcctcttcaatcagtg
cgtgttaagccaatcattgaaaggttgcgcaccttaggtggcacagcgaagcttatcttt
gatgtgatccaatttgaccctgctttggagaaggcagttctttttgctgttgggaatact
ctagtttgtgatgatcttgaagaagccaaggttcttagctggactggagagaggtttaaa
gttgtaactgttgatgggattctactctcaaagtctggcacaatgactggtggtacaagt
ggtggaatggaagctaggtcgaataaatgggatgataagaaaattgaaggcttaaaaaaa
aagaaggaacaatttgaatcagagctggaagagcttggatcaattagagagatgcagcta
aaggagtctgaaacatctgggagaattagtggacttgaaaagaaaatccaatatgctgac
attgagaagaaaagcatagaagacaagcttaaaaacttgaagcaggagaagaagaatatt
aaggataggattggacatataactcctgagattcaaaagttaaaagatgtgagtgataaa
aggagcaaagacatcatgaagctggagaagaggattaatgaaattgttgatcgactcttc
aaaagttttagtcagtctgtaggggtggcaaacatccgtgagtatgaagaaaatcagctc
aaggctgcccagaatatggcagaagagaggcttagcttgagtaatcaacttgcaaagttg
aagtatcagttggagtatgagcgtaaacgagatgtagattcaagaattaagaagctggaa
tcttctatcagttccttggaaaatgatttaaaactggttcacaaaaaagaggctgaagtc
aagttggcaacagaaaaggcttctgaagatatcaatcggtggaaggaagaagtgaaggag
tggaaatccaagtcagaagactgtgagaaggaaattcaggaatggaagaagcaggcttct
gctgctacgacatccatatccaaacttaatcgccaaataaattctaaggagactcagatt
aatcagctggatgaatggaagggggaaatcattgaaaagtgtgacttagagcacattgag
cttcctctcattgcagacccaatggaaactgaatcttcaaatgggaaggagtttgatttt
agtcagttaaatcgatctcttctgcaggatcgaaggccttctgatagggagaagcttgag
gcagaattcaaacaaaaaattgatgctctagtgtctgaaattgaaagaactgctcccaat
ttgaaggctcttgaccaatataagactcttcaagagaaggaaagagatgtaactgaagag
tttgaattagccagaaaagaggagaagcaagtagctgatgaatacaattcagttaagcag
aagagatatgagttgttcatggatgctttcaaccacatttctagtaatatcgataggatt
tacaaacagctaacaaagagtggtacgcatccgttgggtgggacagcatatttgaacttg
gaaaatgaggatgatccttttctacacggtatcaaatacacagctatgccaccaacaaag
cgcttcagggatatggaacaactatctggtggagaaaaaacagttgcagcacttgctcta
ctcttctccatccacagctacaagccttcaccctttttcatattggatgaagtggatgct
gcattggataatctaaacgttgcaaaggtagctggattcatccgttcaaaatcatgtgat
ggagcaaggactagccaggacagtgaaattggaagcggtttccaaagtatagtgatatca
cttaaagatagcttttatgacaaggccgaggctttggttggggtttatcgggattcagag
aagagctgctcgagaactttaacttttgacttgaccaaataccgagagtcatga
DBGET
integrated database retrieval system
