Gossypium hirsutum (upland cotton): 107958822
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Entry
107958822 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107958822
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107958822
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
107958822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
107958822
NCBI-ProteinID:
XP_040968822
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All DBs
Position
A05:3672310..3675101
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AA seq
483 aa
AA seq
DB search
MATFEGGISFSYLSKLEKGNKNAFQFDDDYRDAVCTVPQDKSIVPLGSKSMKNDYLYQFR
AESDDFIDGEYDSGDDVSKSMQNGLYPEVNLKNVLSGLVAIVTGRNKGPPGACVDQQYQS
SNVSFLGSEKKGDTYLHSSVYIPSAPPLLESSGIDYNAYKEVLEAEPPEWIPDSSTSVCM
QCSAPFTALTRGRHHCRFCGGIFCRACSKGRCLLPVKFRERNPQRVCDSCYDRLDPLQGV
LINTISNAVQVAKHDCMDWTCTRGWLNLPVGLSMEHEIYKASNTLRSYCQVARLNPERSI
PWAVLRGAKGLAILTVVKAGVLVAYKLGTGLVIARRSDGTWSAPSALCSVGLGWGAQIGG
ELMDFIIVLHDSKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDSGSGMCYSYSC
SKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALHNLYSS
LRF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctttgagggtggcatttcattttcatacctttcaaagctagaaaagggaaat
aaaaacgcctttcaattcgatgatgattatagggatgctgtttgtactgtgccacaagat
aaaagtattgtcccattaggctcaaagtcgatgaaaaacgattacctctatcagtttcgg
gctgagtccgatgattttattgatggagaatacgattctggtgatgatgtctctaagtca
atgcaaaatggcttgtatcctgaggtgaacttgaagaatgtgttgagtgggttagttgca
atcgtaactgggcgtaataaaggaccccctggtgcttgtgtggatcagcaataccaaagt
tctaatgtatcatttctggggtctgaaaagaaaggagatacatatttgcactcctctgtt
tatataccaagtgctccgccacttctggagtcaagtgggatagattataacgcatataaa
gaggttttagaagctgagcctccggagtggattccggatagttctacttcagtttgcatg
cagtgtagtgctccatttactgcacttacacgtggcagacatcattgccggttttgtgga
gggattttctgcagagcatgttcgaagggaaggtgcttactacctgttaaatttagggaa
agaaatccccagagggtgtgtgattcttgctatgataggcttgatccgttgcagggtgtt
cttatcaataccattagcaatgctgtccaagtagcaaaacatgattgcatggattggacc
tgtacacgtggttggttgaacttaccagttggtttgtccatggaacatgagatctacaaa
gcatccaatacgttgagaagctattgccaggttgctaggttgaatccagagagatctata
ccatgggctgtcttgagaggagccaaaggcttagctattttaactgttgttaaagctgga
gttcttgttgcatataaacttgggactggtcttgttattgctcgaaggtcagatggaaca
tggtctgccccatcagctttgtgctctgttggtttaggatggggtgctcagatcggaggc
gagctcatggatttcataattgtgcttcatgattcaaaagctgtgaagacgttttgtagt
cgaatgcatttttctctaggtgctggctgcagtgctgctgcaggacctgtggggagagtg
ctggaagcagatcttcgagccggggatagtgggtccggcatgtgctacagttatagttgt
agcaaaggggcgtttgttggtgtgtcattggaagggaacattgttgcaacaagaatggat
accaacctacggttctatggtgatccgtatctcaccactgccgacatattactggggacc
gtggacagaccaaaagctgctgagcccttgtatgctgcactacataacctgtactccagc
ctacgcttttag
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