Gossypium hirsutum (upland cotton): 107958833
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Entry
107958833 CDS
T04793
Name
(RefSeq) auxin response factor 19 isoform X1
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
ARF_AD
B3
AUX_IAA
BRWD_AD
PB1
RNF34L-like_3rd
Motif
Other DBs
NCBI-GeneID:
107958833
NCBI-ProteinID:
XP_016750216
UniProt:
A0A1U8PG63
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Position
A05:complement(3571243..3578272)
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AA seq
1104 aa
AA seq
DB search
MKAPPTGFLANPAEGDRKSINSELWHACAGPLVSLPPIGSLVVYFPQGHSEQVAASMQKE
TDFIPCYPNLPSKLICVLHNVTLHADPETDEVYAQMTLQPVNKYDKEALLASDMGLKQSR
QPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPSLDFSMQPPAQELVARDLHENAWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDAKSQLLLGLRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANFSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMF
ETEESGVRRYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPRRVSIWEIEPVVSP
FFICPPPFFRPRFPKQPGMPDDDSDVENAFKRATPWLGDDFGMRGTPSSIFPGLSLVQWM
NMQQSNQFPAAQSGFFPSTVSSNLLHSNLSIDDPSKLLNFQAPVLPAPNMQFNKANPNQV
NQLPQAPTTWSQQILQTPVNQHQQQQPQQQLQQQQPQQPQQQPQPQSHLLHQQQPQPQPS
PKQQQHIHQEQRQQPQQQQPLQQQPTLPPQVTNGIVAPNQISNQNLHQPAVYSHLQQQQL
LTSNSLSTQTTLSAHMTSYPLTSLPQDTRVQQQMEQQPNLMQRQQQQTQLQQSLSQRTQQ
QPQILQLSQQGLSEQLQLQLLQKLQQQQQQSAQQLLSAAGSLLQPPMLQQQQTHQQNQPL
QQLPLSQSQVQPLGSNGFSTSMFVQPQQLSVHQSQSQSKQLMAMRSNSGLIDGDAPPSTL
SSTNNCQVSPSNLINRSHHVPSILMTDPVVEPPSTLAQELLSKPDIQIKHEPPTSRGLDQ
SKYKSSVTDQLEASSSGTSYCLDAGTIQHNAALSFLEGDVQSHSRNNLPFTANIDGLAPE
TLLTREYDSQKDLQNMLSNYGGNPRDIDTELSTAAISCQSFGVPNIPFKTGCSNDVAINE
TGVLNGGLWTNQTQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLVRMFGIEGQLEDP
QSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGNLGNVSVPNQA
CSGSENGNAWRGHYDDTSAVSFNR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctccaccaactggatttttggcaaatcctgctgaaggagataggaagagtatc
aattcagaattatggcatgcttgtgctggaccactggtttctttgccaccaattgggagt
ctggtggtttattttcctcaaggccacagcgaacaagttgcagcatcaatgcagaaggag
actgatttcataccatgttaccctaaccttccttccaagttgatttgtgtcctccataat
gttacattgcatgctgatccagaaactgatgaggtctatgcccaaatgactcttcaacct
gtaaacaaatatgacaaggaagcattactggcatctgatatgggcctcaagcaaagcagg
caacctgctgagttcttttgcaagactcttacagctagtgatactagcactcatggtgga
ttttcagtccctcgtcgagcagctgagaagatcttcccttctctggatttttccatgcaa
ccacctgctcaagagcttgtagcaagagatttgcatgaaaatgcatggacttttagacat
atttatcgaggtcaaccaaagaggcaccttctgactaccggttggagtgtctttgttagc
acaaaaagactcttcgctggtgattctgttcttttcataagagatgcgaagtcacagctt
ctcttgggtctaaggcgcgctaatagacaacagccagctctctcatcatcagtgatttct
agtgatagcatgcatatagggatccttgctgctgcagcccatgctgctgcaaatttcagc
ccatttactatattctacaatccaagggcaagcccctctgagtttgtggtacccttagca
aaatataacaaagccatgtacacccaagtttctcttggcatgcggtttagaatgatgttt
gagactgaggagtctggagtacgaagatacatgggtacagttactggtatcagcgacctg
gatcctgtgcgatggaaaaactcacaatggcgcaatcttcaggttggttgggatgaatct
acagctggagaacggcccaggcgagtttcaatttgggaaattgagcctgttgtatctcct
ttcttcatatgtccacctccttttttcagacctaggtttccgaagcaaccagggatgcca
gatgatgattctgatgtcgagaacgctttcaaaagagctacgccttggcttggagatgat
tttggtatgagaggtacccctagttcaatcttccctggtttgagtttagttcagtggatg
aatatgcaacaaagtaatcagtttccagctgctcaatcaggattctttccatcaacggtt
tcttcgaatctgctgcatagtaaccttagcattgatgatccttccaaattattgaatttt
caagctcctgtattacctgcaccgaatatgcaatttaataaagctaacccaaaccaagtc
aaccagttgcctcaggcacctacgacttggtcccagcagatattgcagaccccggtaaat
caacatcagcagcagcaaccccaacagcaattgcagcaacagcagccacaacaaccacag
cagcagccacagccacagtcacatcttcttcatcaacagcagcctcagccacagccatct
ccaaagcaacagcaacacatccaccaggaacagagacaacagccacaacagcagcagccg
ctgcaacaacaaccaaccctaccgcctcaagtaactaatggtattgttgctcctaaccag
atctcaaatcaaaatttgcatcagccagctgtttactctcacctgcagcagcaacaattg
ttgacaagcaatagcctgtctacccaaactaccctctctgctcatatgacttcatatcct
ttgacgtcattaccacaagatacacgggttcagcagcagatggaacagcaacctaacctc
atgcagaggcagcagcaacagacacaactgcaacaaagcctgtcccagaggacacagcag
cagccgcagattctgcaactatcacagcagggactctcggagcaactgcaattacaactt
ctccaaaaattgcagcagcagcagcagcagtcggctcaacaattactctccgcagctggg
tcactgctgcagcctccaatgttgcagcaacagcaaactcatcaacagaaccaaccattg
cagcagttgcctctttctcagagccaggtgcaaccactgggtagcaatggcttctcaaca
tcgatgtttgtgcaacctcaacaactttcagtgcatcaatcccaaagtcagagcaaacaa
cttatggcaatgagaagcaattctggtcttattgatggagatgctccaccttcgacctta
tcttctaccaataattgtcaggtttccccatcaaaccttataaacagaagtcaccatgta
ccatccatattgatgacagatccagttgttgagcctccaagtacactagctcaagagctc
ctgagcaagcctgatattcaaatcaaacatgagccgcccacctctagaggactagaccaa
tcaaagtacaaaagttctgtaacagaccaattagaagcatcctcttctggaacatcatat
tgcttggacgcaggcaccatccagcataatgccgccctttcctttctggaaggtgatgtc
caatcacattctcggaacaatcttccttttacagctaatattgatggattggcacctgag
actttgttaacaagggaatatgactctcaaaaggatcttcaaaacatgctttctaattat
ggtgggaacccaagagatattgacactgagttgtctactgctgcaataagctgtcagtca
tttggtgtgccaaatatacctttcaagacaggatgctcaaatgatgttgccataaatgag
acaggagttttaaatggcggattgtggaccaaccaaactcaacgcatgcgaacatataca
aaggtgcaaaagcgtggttctgtgggaagatcaattgatgtgacccgctataaagggtat
gatgaactacggcatgatctagtccgtatgttcggtatcgaggggcagctggaggatcca
caaagttctgactggaaattagtttatgtggatcatgaaaatgacatattacttgttggt
gacgatccttgggaagaatttgtaagttgtgttcagagcataaagatactgtcgtcagca
gaagtacagcagatgagcttggatggtaatcttggaaatgtgtcagttcccaatcaagct
tgcagtgggtctgaaaacggaaatgcatggagaggacattatgatgatacctcagcagtc
tcatttaacagatga
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integrated database retrieval system
