Gossypium hirsutum (upland cotton): 107958901
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Entry
107958901 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC107958901
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107958901
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107958901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
Motif
Other DBs
NCBI-GeneID:
107958901
NCBI-ProteinID:
XP_016750298
UniProt:
A0A1U8PJ21
LinkDB
All DBs
Position
A05:complement(5023905..5045025)
Genome browser
AA seq
2534 aa
AA seq
DB search
MDKETELLSRLAANHLNLAQFEPLRATLLALRTKNPELALAILQTIVANSGRFENIAWSP
SCPSPALLTYLSTLELLQFNNATSIWSFDPDTLRLRAEFLLLVQVLIDKVSASLRRDVDL
DKIEKEKESESEGFEEEKPELLDRSDDLKEGNGELGDCVRVLDRFLELGMRRLRPDVVME
GGDADGDEEHKAVLEKVLIEEEEMVCLRNVTMDYADLFDALCENIQRQLKGLDGDDSGMA
IMVRREEKVIVDSFDEEHKGVLSLIQMSVQLAHLDAIKEYLKDGDIEGVVSRIRFLHLGY
GVEDDVYRTLLRDLLKRVLSEKERFGVSRHSTEEKLLRIYGEALSSNCRHLVQMIQVIHD
ELLVEEIEMYRSLDNNQIPPPLEHFHKYLVELKTNADLNNKHWPLSMAASSCMRDLFHFA
RISGLHVLECVMNTVLSAIKRENIEEATDVLVLFPRLRPLIATMGWDLLSGKPILRRNLM
QFLWVSKSHVFQLEEYPLYGNRSDEVSCVEHLCEQLCYHLDIASFVACVNSGQPWSSKFS
LLLSGHENIVSGSEDAKLDTFVENFVLERLSVQSPLRVLFDAVPSIKFQDAIELISMQPV
ASTLEGWKRVEDIELMHMRYALESTVLALGAMESSMTGEKETHQVALCHLQDLKNHLAGI
KNIPRRILMVNVIISLLHMDDISLNLTNCASPGSLFKQSVECGSEHIDLTIYEVGNKMAI
SFTGLLLDIVRHSLPSSTAEEEHASTDGLSMSGRQALEWRISMGKRFIEDWEWRLSILQR
LLPLSERPWSWKEALTILRAAPSKLLSLCMQRAKYDIGEEAVHRFSLSAEDRATLELAEW
VDNAFGNVHVENAVSRAANGSSPVQDLDFSLLCSQLGPLATIFLCIDVAATSARSASMSL
LLLDQAQVMLSEIYPGGSPKVGSTYWDQIHEVGAISVLRRVLKRLHELLEQDSPPVLHAI
LTGEISISAAKDSHRLGQKERALALLHQMIEDAHMGKRQFLSGKLHNLARAITDEEMEVN
FAKEEGPGSDRKVQSILDKDGVLGLGLKAVNQTSVTSTTGDNSVQSVGYDMMDAGKRLFG
PLSAKPTTYLSQFILHIAAIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRGSTDAA
GKVAEIMSADFVHEVISACVPPVYPPRSGNGWACIPVIPTCPRSCSENKVLSPSAKDAKP
SCYSRSSATPGIPLYPLQLDIVKHLVKISPVRVVLACVFGSSMLHSGSDSSISSSLDDDL
LQAPDADRLFYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTAMRRDDDGKVKPETRTV
IKRLRESDSDTESEVDETVNNSNVTTSLDLNVKDNTSPDPWHDSLKPETAEDSTVFLSFG
LENEDPYEKAVERLIDEGKLMDALALSDRFLRNGASDRLLQLLIERGEGSHSASGQPQGY
GGHGTWSNSWQYCLRLKDKQLAAGLALKYMHRWELDAALDVLTMCSCHLPQNDPVRNEVL
QRRQALQRYSHILSVDHHHGSWQEVEAECKEDPEGLALRLAEKGAVSAALEVAESAGLSA
ELRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLGDSDDALPVAMGAMQLLPNLRSKQL
LVHFFLKRRDGSLSDVEVSRLNSWALGLRVLAALPLPWQQRCSSLHEHPHLILEVLLMRK
QLQSASQILKEFPSLRNNSVIISYAAKAVAVSISSPIREPRISVSGTRXKTKTKSGVPAR
SSFTSSLSNLQKEARRXFSWAPRNTGDKTAXKDVYRKRKNSGLPPSERVTWXAMAGIQED
RVSAYADGQERFPSVSIAEEWMLTGDAGKDEAVRASHRYETSPDIILFKALLSLCSDEFV
SAKSALDLCVNQMKNVLGSKQLPENASMETIGRAYHATETFVQGLIYAKSLLRKLTGGND
LSSNSERSKDADDAYSDAGSSSVGSQTDELSEVLSQADVWLGRAELLQSLLGSGIAASLD
DIADKDSSGRLRDRLIVDEQYSMAVYTCKKCKIDVFPVWNAWGHALIRMEHYAQARVKFK
QALQLYKGDPAPVILEIINTIEGGPPVDVSAVRSMYEHLAKSAPTILDDSLSADSYLNVL
YMPSTFPRSERSRRSLESSNSNSPYGPDSEDGPRSNLDSARYTECVSYLQEYARQDLLGF
MFKHGHFNDACLLFFPPNGVPTPAQPSTMGVVTSSSSPQRSDPLTTDYGTIDDLCDLCVG
YGAMSVLEEVISQRISVAKQQNALINQYTAAALGRICTYCETHKHFNYLYKFQVIKKDHV
AAGLCCIQLFMNSLSQEEAIRHLEHAKMHFDEGLSARYKGGESTKLITKGVRGRSASEKL
TEEGLVKFSARVAIQVEVVKTFNDADGPQWRHSLFGNPNDQETFRRRCEIAETLVERNFD
LAFQVIYEFNLPAVDIYAAVAASLAERKKGSQLTEFFRNIKGTIDDDDWDQVLGAAINVY
ANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANAL
PVLDMCKQWLSQYM
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaactgaacttctctcgcgcctagccgcaaaccatctaaacctagctcaa
ttcgaaccgttgcgagctacgcttctagctctacgaaccaaaaaccccgaacttgctctg
gcaatccttcaaacgatcgtcgccaactcgggtcggttcgagaacattgcctggtcacct
tcttgtccatcgccagctcttttaacttatctttcaactctcgaactcttgcaatttaat
aatgctacatctatatggagcttcgatcccgatacattgcggttacgagcggaatttttg
ttgttagttcaagttttgattgataaggtctcggctagtctgagaagagatgttgatttg
gataagattgaaaaagagaaggaaagtgagagcgaaggttttgaggaagagaaacctgag
ttgttggatagaagtgatgatttgaaagagggaaatggtgaattgggagattgtgttagg
gttttagataggtttctggaattgggaatgaggaggttgagaccggatgtggtcatggaa
ggtggtgatgctgatggtgacgaggagcacaaggctgtcttggagaaggttttgattgag
gaagaagaaatggtttgtttgaggaacgtgactatggattacgcagatcttttcgatgcc
ttatgtgagaatattcagaggcaattgaaaggattggacggtgatgattcggggatggct
ataatggtacgaagagaggagaaggtgatagtggattcattcgatgaggaacataagggg
gttcttagtttaatacaaatgagtgttcagttagcccatttggatgctataaaggaatat
ctgaaggatggggatattgaaggagtggtttctcgcattcgttttcttcaccttggttat
ggagtcgaggacgatgtgtatcgcacactcttacgagatctactcaagagggttttatca
gaaaaggaaagattcggagtgtcccggcattccacagaggaaaagttgttacggatttat
ggagaagctctgtcatcaaattgcaggcatcttgtccaaatgattcaagttattcacgac
gagttgcttgttgaagagattgagatgtatagatctcttgataacaaccaaattcctcca
cctcttgagcattttcataagtatttagtggaactgaaaactaatgcagatttaaataac
aagcattggcccttgagtatggcagcaagttcttgcatgagagatttgttccattttgct
cgcatttctgggttacatgtactagagtgtgtgatgaatacggttttatccgccataaaa
agggagaacattgaagaggcaactgatgttcttgtactgttccctcggcttcggcccctg
atagctactatgggttgggatttgctgtctggtaaaccaattttgaggcggaacttaatg
caatttctttgggtaagtaaatctcatgtttttcagctggaagaatatcctctctacgga
aaccgatcagacgaggtatcttgtgtggaacatctctgtgaacaattatgttatcacctt
gatattgcctcttttgttgcttgtgtcaattccggtcaaccatggagttcaaaattctca
ttactattgtctggacatgaaaacatagtatctggaagtgaagatgctaagttagacaca
tttgttgaaaattttgtgttggaaaggctttctgttcaatctccccttcgggtactgttt
gatgctgttccaagcataaagtttcaagatgctattgaattgattagcatgcagccagtt
gcttctactcttgagggctggaaaagggtggaagatattgaacttatgcacatgcgttat
gctttggaatccaccgtccttgcactaggagcaatggaaagtagcatgactggtgagaaa
gagactcatcaagtggcactatgtcatttgcaagacctaaagaaccatttggcgggcata
aaaaatattccacgccggatactgatggtgaatgtgataatttcacttttacatatggat
gatatctctctcaatttgacaaattgtgcctcacccgggagcctttttaaacagtctgtt
gaatgtggttccgaacatattgatttaaccatatatgaagttggaaacaaaatggctata
tctttcacagggttgctacttgatattgtacgtcatagtcttccatcaagcacagctgag
gaggagcatgcatccactgatggtttaagcatgtctgggaggcaggctttggagtggaga
atttcaatgggtaaacgtttcattgaagattgggaatggcgattatcaattttgcagcgc
cttctcccgttatctgaaaggccatggagttggaaggaggcattgactatattacgagca
gccccgtctaagctacttagtctttgtatgcaaagagcaaaatatgacattggagaagag
gcagttcatcggttttcattgtctgcagaagacagagctacccttgaattagctgagtgg
gttgataacgcatttggaaatgtgcatgtagaaaatgcagtgtctcgggcagctaatggg
agttctccggtacaggatttggatttttcattgttgtgctctcaattgggtcctttggct
accatttttctgtgcattgatgttgctgcaacgtcagctaggtctgccagtatgtctcta
ctgcttctggatcaggctcaagttatgttatctgagatatatccaggaggttcaccaaag
gtgggttccacttactgggatcagatccatgaagttggagctatttctgtattacgacgt
gtcctgaaacgtctgcatgagttattggaacaggatagtcctccagttcttcatgccatt
ctgacaggggagatctccatttcagcagctaaggactctcatcgactgggacaaaaagaa
cgtgcccttgcacttctacatcagatgattgaagatgctcatatgggcaagcggcagttt
cttagtggtaagcttcacaatctagccagagctattactgatgaagaaatggaagtcaat
tttgctaaagaggaaggaccaggaagtgatcgcaaagtacaatccattcttgacaaggat
ggtgttcttgggcttgggctaaaagctgtcaatcagacatcagtaacttccacgactgga
gataacagtgtgcagtcggttggttatgatatgatggatgctgggaagaggctttttggt
cctttaagtgcaaagcccacaacctatttgtcacaatttattctccatattgctgcaata
ggtgacatagtggatggaacagatacaactcatgactttaactttttctcacttgtatat
gaatggcctaaagatcttttaactcgtttggtctttgaccgaggcagcacagatgcagct
ggaaaagtagcagagataatgtctgctgactttgttcatgaagtgatttcagcatgtgta
cccccggtttatcctccacggtctggtaatggttgggcatgtattcctgtcatccccaca
tgccctcgtagttgttcagaaaataaagtactttctccttctgctaaagacgctaagcct
agctgttacagtcgttcctctgcaacgcccgggatccccctttaccctctacaattggat
attgtgaaacatttggttaaaatatctcctgtcagggttgtattggcttgtgtttttgga
agcagtatgttacacagcggcagtgactcttctatatctagctccttggatgatgattta
ttgcaggcacctgatgctgatcggttgttttatgagtttgctcttgatcaatctgaaagg
ttccctactttgaatagatggatacaaatgcagactaatcttcatagagtttcagaattt
gccgtgacagctatgcgaagagatgatgatggcaaggttaaacctgaaacaagaactgtt
attaaaagactgcgagaatctgacagtgacactgagtcagaagttgatgaaactgtcaat
aattctaacgtcacaacatccttggacctaaatgttaaagataacacttctccagaccca
tggcatgactccttaaaacctgaaacagctgaagatagtacagtttttctttcttttggt
ttagagaatgaagatccatatgagaaagctgtggaacggttgattgatgaaggaaagtta
atggatgctcttgcactctctgatcgctttctgcgtaatggagcttcagaccggttgctt
caactactaattgaacgaggagaaggaagccattcagcctctgggcaacctcagggttat
ggggggcatggcacctggagcaatagttggcagtattgcctgcggttgaaggacaagcaa
ctggcagctggacttgccctcaagtacatgcacagatgggaacttgatgctgctttggat
gttctgaccatgtgcagctgccacctgcctcaaaatgatccagttaggaatgaggtcctg
caaaggagacaagctttgcagcggtacagccatatattaagtgtagatcatcaccatgga
agctggcaagaggttgaagctgagtgtaaggaagatcctgaaggcttagcgctaagatta
gctgagaaaggagctgtttctgctgctttagaagttgctgaaagtgctggattatcagca
gaactgcggagagaacttcagggccgacagcttgtgaagcttctcacagcggatcctttg
aatggtggaggaccagcagaagcttcccgttttttatcatcactaggtgactctgatgat
gctctaccagtcgctatgggtgcaatgcaactattacccaacctacggtcaaaacaactt
cttgttcacttcttcttgaagcgaagagatgggagtctgtcagatgttgaggtttctcga
cttaactcgtgggctttaggccttcgtgttctagctgccttaccactgccttggcagcaa
cgatgttcttccttgcatgagcacccacatttaatattggaggttctactgatgaggaaa
caactgcaatctgcctcacagatccttaaagagtttccttctttgagaaacaacagtgtt
atcatatcatatgctgctaaagctgttgctgttagtattagctctccaattcgggagcct
cggatatctgtttctggaacacggnccaaaaccaaaacaaaatcaggtgtacctgcaagg
tcatccttcactagtagtttaagcaacttgcaaaaggaggctcgtagangcttttcctgg
gctccacgtaatactggagacaagactgccnccaaagatgtttatcggaaaagaaagaat
tctggtctgccaccttctgaaagagttacttggnaggcaatggctgggattcaagaggat
cgggtatcagcgtatgcggatgggcaagagcggtttccttctgtctcaattgctgaggaa
tggatgctaacaggtgatgctggtaaagatgaagctgttcgagcatctcacagatacgaa
acttcccctgacattattctcttcaaggcgttgctttccttatgttctgatgagtttgtg
tctgcgaagagtgccctagacttatgtgttaatcagatgaaaaatgttttgggctccaag
cagttgcctgagaatgcatcaatggaaacaattggtcgagcatatcatgctactgagaca
tttgtccagggactaatatatgctaaatcgctgttgaggaaactcactggtggcaacgat
ttgtccagtaattctgaaagaagcaaggatgctgatgatgcatactctgatgctggtagc
tcaagtgtgggtagccagacggatgagttatctgaagttttgtcacaagcagatgtttgg
ctgggacgtgctgagcttcttcaaagccttctgggatctggcatagctgcttctcttgat
gatattgctgacaaggactcatctggccgtctccgtgacaggttgattgttgatgaacag
tatagcatggctgtgtatacttgcaagaaatgcaagattgatgtttttcctgtatggaat
gcatggggacatgctttgattcggatggagcattatgcgcaagcgcgtgtgaagtttaag
caagctcttcaactttacaagggtgatcctgcacctgtcattctagagatcattaataca
attgaaggaggaccacctgtggacgtgtcagctgttcgttccatgtatgaacatttggcc
aaaagtgcaccaacaatcttggatgattctctttctgccgattcatatctcaatgttctg
tacatgccatctaccttccctcgttcagagagatcaaggcggtctctagaatcttcaaat
agtaattctccatatggccctgactctgaagatggaccacgtagtaacttggacagtgct
cgttatactgagtgtgttagctatttgcaagaatatgctcgtcaggatttgcttggattt
atgtttaagcatggtcacttcaatgatgcatgcttgttattctttcctcctaatggtgtt
cctacacctgctcaaccttcaacaatgggagtagtaacttcatcatcgtcccctcaaaga
tcagaccccttgacaactgattatggaaccattgatgatttgtgtgacttgtgcgttggg
tatggtgctatgtcagttctggaggaagtgatttcacaaagaatttcagttgcgaaacag
cagaatgcattgataaatcaatatacagctgctgctcttggccgtatttgcacttattgt
gaaactcataagcactttaattatctatacaaatttcaggtaatcaagaaggatcatgtt
gcagccggactctgttgtatccagttatttatgaattctttgtctcaagaggaagctatc
agacatttggaacatgctaagatgcattttgatgaggggttatcagcacgatacaaaggt
ggagaatctaccaagctgatcacaaagggcgttagaggaagaagtgcctctgagaaactt
acagaagaaggacttgtcaagttttctgctagagtggcaatccaggtggaagttgtgaaa
acctttaatgacgcagatggaccacagtggagacattcactttttgggaatccaaatgat
caagaaacctttaggaggaggtgtgagattgcagaaactcttgtcgagaggaactttgat
ttggcattccaagttatttatgaatttaatcttccagctgttgacatatatgctgctgtt
gctgcatcgcttgctgaaaggaaaaagggcagccagttgacggaatttttcagaaacatt
aaaggaacaattgatgatgatgattgggaccaggtattgggggctgctattaatgtgtat
gctaacaaacacaaggaacgcccagaccgtctcattgacatgctgactagtagtcacagg
aaagtgctggcatgtgtggtttgtggtcgcctaaaaagtgctttccaaattgcatctcga
agtggaagcgtggccgatgttcaatatgttgcacatcaggctttacatgccaatgctctt
cccgtgcttgatatgtgtaaacaatggctgtctcagtacatgtaa
DBGET
integrated database retrieval system
