Gossypium hirsutum (upland cotton): 107959002
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Entry
107959002 CDS
T04793
Name
(RefSeq) two-component response regulator ARR12-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107959002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107959002
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
107959002
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
107959002
NCBI-ProteinID:
XP_016750436
UniProt:
A0A1U8PGU7
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Position
A05:5707412..5711585
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AA seq
659 aa
AA seq
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MRVGRVISDENDSFPVGMRVLAVDDDPTCLLLLETLLTKCKYNVTTTSQAITALKMLREN
KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGITHGACDYLLKP
VRIEELQNIWQHVIRRKKFDRKDRNGSGSQDKPYIDSSEAAGLGNVDQNGKFNKKRKDQN
EDEDEERDENGHDNEDLSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILELMDVEN
LTRENVASHLQKFRLYLKRISCVANQQANMAAALGSVDSTHLRMGTMNGLGNFHTLAGPD
QIHNAAFRSFQHSGVLRRLNTPSGVGISGLPSSGLVQLSPVQNLGNTSTNQSKLQSFVIP
GNHNANILQGMPMSLEFDQLQNNRAASHVGQFPSVDNTTVLPVSSISASLIDAGCSSSPL
LGVTSNSLLLEGSSQLPTLHARNLRDSVSGFPNRSTLSDFTSIAPASNQLHGSKADIQDQ
ASPISCNAGKIISSAPQDWNAPKKDAPYQSNVPSCSINSLRAVNGDMAWLGQCLDQNNPI
FNRNVGFDFVDPLSIKFSEGENLAMEPSVIEKEGYLMVQPSRQGSYIPDNEDENFAMEPS
VIEKEGYLIVQPRRQGSYIPGNLGSLEDLASAITKQDHDKGKPTDGDFGYNDYSLRTCI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagagtagggcgagtaatcagtgacgaaaatgattcgtttccagttggtatgcgtgtt
ttggcggtagatgatgatccaacttgccttttactgctcgaaaccttgcttactaagtgc
aagtataatgttaccaccactagtcaggctattacagcattgaagatgttgagagaaaac
aagaacaagtttgatttggttatcagcgatgtccatatgcccgacatggatggttttaag
ttgcttgagcttgtgggacttgagatggacctgcctgtcataatgttgtctgcaaatggt
gataccaagcttgtgatgaaagggattactcatggggcttgtgattatttgttgaaacct
gttcgaattgaggagctacaaaatatatggcaacatgtaatcaggagaaagaaatttgat
aggaaagaccggaatggttctggcagccaagacaagccttatattgacagcagtgaggct
gcagggttaggaaatgttgatcagaatgggaagttcaacaagaagaggaaggatcagaat
gaagatgaagatgaggagcgtgatgagaatggacatgataatgaggatttgtcaacccaa
aagaaacctcgtgttgtttggtcagtggagttgcatcgcaaatttgttgcagcagttaat
caactgggcattgagaaggctgtacctaaaaagatcctagaattgatggatgttgaaaat
cttaccagagaaaatgttgccagtcatctccagaaatttaggctttaccttaaaagaatc
agctgtgtggcaaaccagcaagccaatatggcggcagccttaggcagtgtagattctacc
catttgcggatgggaactatgaatggacttgggaatttccatacattggctggacctgat
cagattcacaatgcagcctttagatctttccaacatagtggtgtgctcagaagattgaac
acaccttctggggtaggtatcagtggacttccttcttcaggattggttcaattaagtccg
gttcaaaacttgggaaataccagtaccaatcagagcaagttgcaatcttttgtaattcct
ggtaaccataatgctaacattctacaagggatgccaatgtcattagaatttgatcaactg
caaaataacagggcagctagccatgttggacagtttccatctgttgataatacaactgtt
ttgcccgtttcctccatttctgccagtttaatagatgcaggctgctccagtagtcctctt
cttggtgttactagcaactccttgttgttagagggaagctcgcagctgcctactttgcat
gctcgtaatttgagagacagtgtttctggcttccccaacaggagcaccttgtccgacttt
acttccatagctcctgcttccaatcaattacatggttcaaaagcagatatacaagaccaa
gcatccccaatcagctgtaatgcggggaaaataatcagtagtgctcctcaagactggaat
gccccaaagaaagatgccccttaccaatcaaatgttccaagttgttcaataaactcttta
cgggctgttaatggtgatatggcttggttgggccaatgcttggatcagaataacccaatt
ttcaacagaaacgtgggttttgattttgttgatcccttatccatcaagtttagtgaaggt
gaaaacttagctatggaaccatcagttattgaaaaggaagggtatcttatggtccaacct
agtcgacagggaagttacattcctgataatgaagatgaaaactttgcaatggaaccatcg
gtcattgaaaaggaagggtatcttatagtccaacctaggcgacagggaagttatattcct
ggtaatcttggctcattggaagatctggctagtgcaattacgaaacaggaccatgataaa
gggaaaccaacagatggtgattttggatacaatgattattctctcagaacgtgcatttga
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