KEGG   Gossypium hirsutum (upland cotton): 107959041
Entry
107959041         CDS       T04793                                 
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit I-like
  KO
K03246  translation initiation factor 3 subunit I
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ghi03012]
    107959041
Translation factors [BR:ghi03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    107959041
SSDB
Motif
Pfam: EIF3I WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st NBCH_WD40 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_DCAF12 FCP1_C Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 107959041
NCBI-ProteinID: XP_040969188
LinkDB
Position
A05:complement(9596258..9599335)
AA seq 326 aa
MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWSCDV
SRDSMRLITGSADQTVKLWNVQTGSQLYTFNFGSPARSVDFSVGDKLAVITTDPFMELTS
AIHVKRIARDPAEQTEESELVIKGPQGRINRAVWGPLNRTIISAGEDAIIRIWDSETGKL
LREADKESGHKKTITSLTKSADGSHFLTGSLDKSAKLWDTRTLTLIKTYVTERPVNAVAM
SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG
KSFSSGGEDGYVRLHHFDPDYFNIKI
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaggccgattttgatgaaaggtcatgaaaggccattgacgtttctcaagtacaacaga
gatggagatcttttgttctcatgcgctaaggaccatacccctaccgtttggttcgccgac
aatggcgagcgtctcggcacttatcgtggccataatggcgccgtttggtcttgcgacgtc
tcaagggattcgatgaggcttattacgggaagtgccgatcaaactgtgaagctgtggaat
gttcagacgggatctcaattatatactttcaatttcggttctcctgcgaggtcggtggat
ttctctgtaggggataaactagctgtaattactacggatcctttcatggaattgacttcc
gctattcacgttaaacgcattgctagagaccctgctgaacagactgaggagtctgagctt
gtcatcaagggccctcaaggtagaataaacagagctgtttggggacccctcaataggact
atcattagtgctggagaagatgccataatccgtatatgggattctgagactggaaaacta
cttagagaggctgacaaggaatcgggtcacaaaaagacaataacatcacttacaaaatct
gcagacggttcacacttccttactggttccttagataaatctgccaagctatgggacaca
agaacgttgactcttatcaagacctatgttactgaacgtccggtcaatgctgttgctatg
tctccacttctcgaccatgtggtgcttggaggtggtcaggatgcatcagctgtcacaacg
acagatcatcgtgctgggaagttcgaagctaaattctttgacaagattcttcaagaagaa
attggaggtgtaaaaggtcattttgggcccataaatgccttggcttttaacccagacggg
aagagtttctcgagcggtggtgaggatggttatgttcgattacaccattttgacccggat
tacttcaacatcaaaatataa

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