Gossypium hirsutum (upland cotton): 107959068
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Entry
107959068 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107959068 isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107959068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107959068
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107959068
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
107959068
NCBI-ProteinID:
XP_016750524
UniProt:
A0A1U8PJY0
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Position
A05:complement(9347209..9352556)
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AA seq
1330 aa
AA seq
DB search
MMAIEKNNFKVSRFDSEFSYGSRETTVSSDEDELQRQSSAVDSDGDDDDDDEFDDADSGA
GSDDFDLLELGETGAEFCQVGNLTCSVPFELYDLPGLEDILSLDVWNECLSDEERFSLTK
FLPDVDQDTFMRTLNDLLKGDNFHFGSPIKKLFDMLKGGLCEPRVALYREGLNFFQKRQH
YHHLRKHQNNMVANLCQIRDAWLKCRGYGIEERLRVLNIMRSQKSLMYDKFKDEDSESSK
REDLNDGLWSKKEKDRKASQKKARYSGYGVEPNLEFISRGQLMALEPAKYGKQNPKGMLK
TGTLPRQKYESGAVLRSRDWMRLDDDAEDPMFGAGIRRDRNVVRDSIMGKSGSLRTGKKY
ERPEEFAGDSSAALPLSSKHDLQAYGRNRDMNKLSEAKMYTSKPPNRTSDDLPKKVKYSE
NHLQFAVGKQIKSSKGRTPPFPLKGSRVDLSECAEMFCQNKNHGEDISVDSSVRSDDWNV
RSKKWKTGRDSPDVSFKSYKVSSPLMNDRILQSDSRTKPLQEKTRANYVQKRGPVSKGSR
AFIRNEETESGSSEQFDNDEDSNPLMRSKLAYPTGIIKDSQLSSLKSGVDSKKTKSLKKN
SMEDGWTVDGITHFSKKSFREDVHVPGVENYYFKGKQKGKMSESPLLNSTSRLMDEVDRK
QVYKLGKSAQLRGEPGNGLHKSSSRVYPTDKRQKGELAYDHSTSQSNYLRDYLVDEEDAL
PVTLSLADENNPGRNTKKGQSIEAYDRCEKSEASLRGCNKGTKKRKGKEYVAHVDRRGED
GNLQSNLEQQIDDSLFLKKKGKRKLEADISASDMEASEPHGAELGAIDVEIETKPQKKPF
ILITPTVHTGFSFSIIHLLSAVRLAMITPLPEDSLEVSKPREEQNGKQEGGANGVLSCEN
AVSNDLDHPVQASALSLTVHEIVSRVAANPGDPCILETQEPLQDLVRGVLKIFSSKTAPL
GAKGWKALVAYEKSTKGWSWVGPVMHSSNDHETIEEVTSPEAWGLPPKMLVKLVDSFANW
LKNGQETLQLLGSLPAPPLELMQANLDEKERFRDLRAQKSLSTISPSSEEVRAYFRREEL
LRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPPHVTILCIVRDAA
ARLPGSIGTRADVCTLIRDSQYIVEEVSDAQVNQVVSGALDRLHYERDPCVQFDGERKLW
VYLHREREEEDFEDDGTSSTKKWKRQKKDAAEQPDQGAVTVAFHGTGDQSGDLVSDLNVE
PPCCDKKMETDSHNTQNVEDNVDTSHGSEQGNTQQHGHPVQESKLLCQENSTNEDFDQHF
SFAGQSPPRG
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgattgagaagaataacttcaaagtttcacggtttgattcggagttctcgtat
ggtagtagagagacgactgtgtcgagtgatgaggatgagcttcaacgacaaagctcagct
gttgattctgatggcgatgatgatgatgatgatgaatttgatgatgctgattcaggagca
ggttcggatgactttgatttattggaattaggagaaacgggggctgaattctgccaagtt
gggaacttgacttgttctgttcctttcgagttgtacgatctacctggattggaagatatt
ttgtctcttgatgtgtggaatgagtgtttaagtgatgaggagcggtttagccttactaaa
tttttgcccgatgtggatcaggatacatttatgcggactttgaatgaccttcttaagggt
gataattttcattttgggagtcctataaagaagttgtttgatatgttgaaaggaggctta
tgtgagccaagggtcgcactttatcgggaaggtttgaatttctttcagaagcgacagcat
taccatcatttgaggaagcatcagaataatatggttgccaatctttgtcaaataagggat
gcttggcttaagtgcaggggatacggtatcgaggagcggcttcgtgttttgaacattatg
agaagtcagaagagtttgatgtatgacaaattcaaagatgaggattctgaatcctccaaa
agagaggatttgaatgatggattgtggagcaaaaaggagaaggacaggaaagcttcacag
aaaaaggcacgctactcgggctatggggttgaaccgaatttagaattcatttcccgagga
cagctgatggctttggaaccagcaaaatatgggaagcagaatccaaaaggtatgcttaag
acaggaactcttcctcgacagaaatatgagtcaggggctgtcctcaggtctagggattgg
atgaggttagatgatgatgccgaagacccaatgttcggagcaggtattcgaagagaccga
aatgttgtgcgtgatagcattatgggaaaatctggttcattgagaacagggaaaaagtat
gaaagaccggaagaatttgctggtgatagttctgcggctttgcctttgtcttcaaagcat
gacttgcaggcctatggtaggaacagggatatgaataaattgtcagaggcaaaaatgtat
acttcaaagcctcctaacaggacatctgatgatttgcccaagaaggtcaagtattctgaa
aaccatctgcaatttgctgttggaaaacaaattaagtcttcgaagggccgaactcctcca
tttccattgaaagggagtcgagttgacttatctgaatgtgctgaaatgttttgtcaaaat
aagaaccatggagaagatatctctgtggattcttcagttagatctgatgattggaatgtt
aggagcaagaaatggaaaacaggacgagattctccagatgtcagttttaaatcttataaa
gtttcttcaccactgatgaatgatcgaatcctgcagtctgacagtagaacaaaacctttg
caggagaagaccagagcgaactatgtgcaaaagagaggccctgtttccaaaggcagtaga
gcgtttattagaaatgaagaaacagaatccggctcatctgagcaatttgataatgacgag
gatagcaatcctctaatgagaagcaaattggcataccctacgggtatcataaaagattct
cagttgtcttcattgaagtccggtgtagattctaaaaagaccaaatctttgaagaaaaat
tctatggaggatggatggactgttgatggaatcactcacttctccaagaagagctttagg
gaagatgtgcatgtgcctggagtagaaaactactattttaaaggaaaacagaagggcaag
atgagtgaaagccccttgcttaactctacttctagattaatggacgaggttgataggaaa
caagtttacaagttgggtaaaagtgcccagttacgaggggaacctggtaacgggttacac
aagtcctcatcgagggtctaccctactgacaaaaggcagaaaggtgaactcgcctatgat
cattctacgtctcagtcaaattatctgcgtgattatcttgttgatgaggaggatgcttta
cctgtgacactctcgttagctgatgaaaataacccgggtagaaatacgaagaaaggtcag
agcattgaagcatatgatcgctgtgaaaaatccgaagcttcattacgagggtgcaacaaa
gggacaaagaaaaggaaggggaaggagtatgtggcacatgttgatagaaggggcgaagat
ggtaacctgcagtctaaccttgagcagcaaatcgatgattcccttttcttgaagaaaaag
ggaaagcgaaaactggaggctgatattagtgcttctgatatggaagcttctgaaccacat
ggtgcagaattaggagccatagatgtggagatagaaaccaaaccacagaaaaagccattt
attttgatcacccccacagttcatactggtttctcgttctcaattatacatcttctttct
gcagttcgcttggcaatgattacaccacttccagaagactccttagaggttagcaagcct
agagaagagcaaaatggaaagcaggaaggtggcgcgaatggagttctttcttgtgaaaat
gcagttagcaatgatttggaccatcctgtgcaagcaagtgcgctttctctaactgttcat
gagattgttagtcgggtggcggcgaatcctggggatccatgtatccttgagacacaagag
ccgcttcaagatttagttcggggagttctgaaaattttctcatcaaaaacagcacctttg
ggagcaaaaggctggaaggcacttgttgcctatgagaagtccacaaaaggttggtcttgg
gttggtcctgttatgcatagctcaaatgatcatgagactattgaggaggtaacatcaccc
gaagcctggggtctgccaccgaaaatgcttgtcaagttagttgattcatttgccaattgg
ctgaaaaatggtcaggagactctccagctattagggagtcttcctgcaccaccgcttgaa
ttgatgcaagccaatttagatgagaaagaaaggttcagagacctaagagctcagaagagc
cttagcaccattagtccaagttctgaagaagtgagagcttatttccgtagggaggagctt
cttagatattctattcctgacagggccttctcttacacggctgctgatggcaaaaaatct
atagttgctcccttgcgaaggtgtggaggtaaaccaacttcaaaggctcgagatcatttt
atgctgaaacgtgaccggccaccacatgttacaattctttgtattgtgagagatgcagct
gccagattgcctggaagtatcggcacccgtgcagatgtttgtactttgataagagactcc
cagtacattgtcgaagaagtttctgatgcacaagttaaccaggttgttagcggggcctta
gaccgtttgcattacgaacgagatccttgtgtacaatttgatggagagaggaaattgtgg
gtttatttgcatagagaaagagaagaagaggattttgaggatgatggtacttcatctact
aagaaatggaagaggcagaaaaaagatgctgctgagcaacctgatcaaggagccgtaact
gtggcttttcatgggactggggatcaatcaggagatttggtctctgatcttaatgtcgag
cctccatgctgtgataaaaagatggagacagattcccataatacacaaaacgtggaggat
aatgttgacaccagtcatgggtctgagcaaggtaacacccaacaacatggtcatcctgtg
caagaaagcaaattgctatgtcaagaaaattccactaatgaagattttgatcaacatttc
agttttgcaggtcagagtccaccaagagggtag
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