Gossypium hirsutum (upland cotton): 107959078
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Entry
107959078 CDS
T04793
Name
(RefSeq) 3-ketoacyl-CoA synthase 12-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00062
Fatty acid elongation
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi04626
Plant-pathogen interaction
Module
ghi_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
107959078
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107959078
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
107959078
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
107959078
NCBI-ProteinID:
XP_040969161
UniProt:
A0ABM3BQ40
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Position
A05:9268959..9271074
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AA seq
467 aa
AA seq
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MESFSFLLIISIFYLLFKIWNWINNVRDQQCYILDYQCYKPSDDRMVGTEFCGEVIKRNK
NLGLNEYKFLLKAIVSSGIGEQTYAPRIMFSGREESPKLEDGILEMEEFFHDSIEKVLSR
AGISPQEIDLLVVNVSMLSTVPSLCSRIINHYKMRPDIKSFNLTGMGCSASLISLDIVRN
VFKSYKNKFALLVTSESLSPNWYAGNDRSMILSNCLFRSGGCAVLLTNKKSLKHRAMFKL
KCLVRTHHGAKDESYGCCIQREDDKGRMGFHLSKSLPKAATRSFVDNLRVITPKILPVRE
LVRFMAVSLLKKWNVVRHGSSHKGASQGPIKAGVNFKSGVDHFCIHTGGKAVIDGIGISL
DLTEYDLEPARMTLHRFGNTSASSLWYVLAYMEAKKRLKKGDKVLMISFGAGFKCNSCLW
EVVRDLGDGNVWKDEIYMYPPKTLVNPYMEKFGWIQDEDPSTFNPGD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttctcttttttgttgataatttcaattttctatcttctcttcaaaatatgg
aattggatcaataacgtgagagaccaacaatgttacattttggattaccaatgctacaag
cccagtgatgataggatggtggggactgagttctgcggggaagtgataaagaggaacaag
aatctcggactcaacgagtacaagttcttgctgaaagccattgtcagttcaggcatcgga
gaacaaacctacgccccgaggatcatgttttccgggagagaagagagcccgaaactggaa
gatgggatcttggaaatggaagagttttttcacgatagcatcgagaaggtgttatcaagg
gcaggcatatctcctcaagaaatcgatctcttagtcgtcaatgtctccatgttatccaca
gttccttctttgtgttctcggatcataaaccactacaaaatgagaccagacatcaagtct
tttaacttaactggaatggggtgtagtgctagtctgatttctcttgacattgttcgcaat
gtcttcaagtcttacaagaacaagttcgcattgcttgtgacttcggaatcgttgagtccg
aattggtatgctggcaacgatagatcgatgattctctccaattgtttgttccgttcgggt
ggctgcgcagtacttttgacgaacaagaagtccttgaagcatcgagcaatgttcaaattg
aaatgcttggtgagaacacatcatggagccaaagatgagtcgtatggttgttgtatccaa
agggaagatgataaaggaaggatgggatttcaccttagcaaaagccttcccaaagccgca
actcgttctttcgtcgataatttgagggtcatcaccccaaagatcctgcctgttagggaa
ctagtccggttcatggcagtttcactccttaaaaaatggaacgtcgtccgccatggttct
tcccacaagggagcttctcaaggaccaatcaaagctggggtgaacttcaagagtggggtg
gaccatttctgcatccacacaggagggaaagcagtgatagatgggatcggaataagcctt
gatttgaccgagtatgatttggagccagctaggatgacactgcatcgatttggcaacaca
tcggcaagtagcctgtggtatgttttggcatacatggaagccaaaaagaggctgaagaaa
ggggataaggtgttgatgataagctttggtgctggctttaaatgcaacagttgtttgtgg
gaggttgtaagggatttaggagatgggaatgtatggaaagatgaaatttacatgtaccca
ccaaagacattggttaatccttacatggaaaagtttggctggattcaagatgaagatcct
agcaccttcaatcccggagattaa
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