Gossypium hirsutum (upland cotton): 107959162
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Entry
107959162 CDS
T04793
Name
(RefSeq) neutral ceramidase 1 isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
Module
ghi_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107959162
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
107959162
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
107959162
NCBI-ProteinID:
XP_016750642
UniProt:
A0A1U8PHG1
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Position
A05:complement(8698079..8702923)
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AA seq
801 aa
AA seq
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MRNASIQGHELSAAWCTYLCMMELLASIDCYFWSTSRTICLWMSLVLLLQYSKTVVSKSD
YLIGLGSYDITGPAADVNMMGYANAEQIASGIHFRLRARSFIVAEPQGKRVVFVNLDACM
ASQLVTIKVIERLKARYGELYTEQNVAISGIHTHAGPGGYLQYVVYLVTSLGFVRQSFDA
LVDGIEKSIMQAHENLRPGSIFVNKGELLDASVNRSPSAYLNNPASERRKHKYDVDKEMT
LLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEKNGIRSSDTNE
SGSDGVPRRVSNIIPNIHDNYNKLLELAASFRSSPGSPATQTMSVARRVRGALRQADKPR
FVSAFCQTNCGDVSPNVLGAFCTDTGLPCDFNHSTCGGKNELCYGRGPGYLDEFESTRII
GERQFRKAVDLFEKASEQLKGEVDYRHTYIDFSQLEVTLTKVGGGSEVVKTCPAAMGFAF
AAGTTDGPGAFDFKQGDDQGNPFWRLVRDVLKTPDKKQVDCQHPKPILLDTGEMKQPYDW
APSVLPIQILRIGQFVILSVPGEFTTMSGRRLRNAVKTVLTRSGNGEFGSNTHVVIAGLT
NTYSQYVATLEEYQVQRYEGASTLYGPHTLSAYIQEFQKLATALIKGQPVEAGMPPPDLL
QKQISLLTPVIMDSTPAGKNFGDVSSDVPANSTFKRGSTVTVVFWSACPRNDLLTEGTFA
LVEMLQGKDTWIPMYDDDDFCLRFKWSRPSKLSPRSKATIEWIIPSSSSPGVYRIRHFGA
SKGLMGSIRHFTGSSSAFVVA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgcttcgatccaggggcatgaactaagtgctgcttggtgtacttatctgtgt
atgatggagttacttgcttccatcgactgttacttttggagtacttcgagaactatttgc
ttatggatgtctctggtgcttttgctccaatatagtaaaacagtagtatccaaatccgac
tatttgatcggacttggaagctatgacattactggtcctgcagccgacgttaacatgatg
ggatatgctaatgcggaacaaattgcctcggggattcacttcaggctgcgagctcgctca
ttcattgtggctgagccacaggggaaacgagttgtatttgttaaccttgatgcttgcatg
gcttctcaattagtgacgatcaaagtgattgagagattgaaagcaagatatggggagtta
tatactgaacagaatgttgctatcagtggtattcatacccatgccggtccaggaggttat
ctccaatatgtagtgtatcttgtgacatctttaggatttgttcgtcagtcatttgatgcc
ctggtagatggcatcgagaaaagtatcatgcaagctcatgaaaatcttcgacccggatct
atttttgtgaacaagggagaactactagatgctagtgtaaaccgaagtcccagtgcctat
ctcaataaccctgcatccgaacggagaaaacataaatatgacgttgataaagaaatgacc
cttttaaagttcgtagacgaccagtggggtccagtgggtagtttcaactggttcgcaact
cacggaacatcgatgagtcgtacaaactcactgatcagtggggataacaaaggtgcagca
gctagatttatggaagactggtttgagaaaaatggcatcagaagttcagatactaatgaa
tcgggctctgacggagtacctcgaagagtctctaatatcatccccaacatccatgataat
tacaataagttactggagcttgctgcatccttccgctcatctcctggtagcccagcaaca
caaactatgagtgttgccagacgcgtcagaggtgctcttagacaggctgataagcccaga
tttgtatctgcattttgccagacaaattgtggtgatgttagtcccaatgtactcggagca
ttttgcaccgacaccggtcttccttgtgacttcaatcatagtacctgtggtggaaagaat
gagctgtgctatggccgaggaccaggctatcttgatgagtttgaaagtactcgtattatc
ggagagaggcaattcagaaaagccgtggacttgtttgagaaagcatctgaacagttaaaa
ggagaggttgattatcgtcacacttacatagacttttcccagcttgaggtaacacttact
aaagtgggaggaggttctgaggtagttaaaacttgtcccgctgcaatgggatttgcgttt
gctgcaggaacaactgatggacctggagcatttgattttaagcaaggagatgaccaggga
aaccctttttggaggcttgtccgtgacgtacttaaaactcccgataagaaacaagttgat
tgtcagcatccaaagcccatcttgctagatactggtgaaatgaagcaaccatatgattgg
gcgccttcagtacttccaatccagatccttcggatagggcagtttgtcattctcagtgta
ccaggagaatttacaacaatgtctgggaggcgtctccggaatgctgtgaagacagtgctt
acaaggagtggtaatggggaatttggtagtaacactcatgttgttatagctggcttgact
aatacatattcacagtatgttgcaactttagaagagtaccaagtgcagagatacgagggt
gcctccacactgtatggtccacacacactcagtgcctacattcaggaattccagaagctt
gcaactgctcttatcaaaggtcaacctgttgaagccgggatgccgcctccagatctccta
cagaagcaaataagcttactcactccagttataatggactcaacccctgctggtaaaaac
ttcggggatgtcagctccgatgttccagctaactcaacgttcaagagaggcagcaccgtg
accgttgttttctggtcagcttgcccccggaatgatctcttgacggaaggtactttcgcc
cttgttgagatgctccaagggaaggatacatggattccaatgtacgatgacgatgatttc
tgccttcgctttaaatggtcaagaccttcaaagctaagcccccggagtaaggcaacaatc
gaatggataatcccatcatcttcctcaccgggagtatacagaataagacatttcggtgct
tcaaaagggcttatgggatcaattcggcatttcactggttcatcaagtgcttttgtagtg
gcatga
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