Gossypium hirsutum (upland cotton): 107959238
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Entry
107959238 CDS
T04793
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107959238
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107959238
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107959238
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107959238
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107959238
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107959238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107959238
NCBI-ProteinID:
XP_016750733
UniProt:
A0A1U8PKA0
LinkDB
All DBs
Position
A05:7423936..7437966
Genome browser
AA seq
1116 aa
AA seq
DB search
MTVMTPAPIDQQEDEEMLVPHSDLTDNHQPMEVVSQAENANTVENQKVEDPPSSRFTWKI
DNFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSASLPYGWSRYAQFS
LAVVNQIHSKYSIRKDTQHQFNAREIDWGFTSFMPLGELYDPCRGYLVNDTLVVEAEVVV
RKIVDYWAYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYQAEQYGLQDAKKGVLFIDFPPVLQIQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
DDGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWYKFDDERVTKEDL
KKALEEQYGGEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
RERLKKEQEEKEHKKKEKAEAHLYTIIKVARDDDLAEQIGKDICFDLVDHDKVRSFHIQK
QMPFNVFKEEVAREFGIPVQFQRFWLWAKRQNHTYRPNRPLIPLEETQSVGALKEVSNKV
HNAELKLFLEVELGLDLRPIAPPYKTKEDILLFFKHYDPEKEELRYVGRLFVKSAGKPIE
ILSRLNKMAGYAPDEEINLYEEIKFEPSVMCEPIDKKITFRASQLEDGDIVCFQKSLPVE
STNQYRYPDVPSFLEYVHNRQVVHFRFLEKPKEDDFCLEMSRLYTYDDVVERVAQQLGLD
DPTKIRLTSHNCYSQQPKPQPMKYRGVDHLSDMLFHYNQTSDILYFEVLDIPLPELQGLK
TLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYNKIYKI
FPPNEKIDNINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKETAQNQMQILNFGEPFF
LVIHEGETLAEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYG
AWEQYLGLEHSDNIPKRACAINQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgactcctgcacccatcgatcaacaggaagacgaggaaatgctcgtgcca
cactctgatttgaccgacaatcatcagcccatggaagttgtatcacaagctgagaacgca
aatacagtggaaaatcaaaaagtggaggatcctccttcgtcaagattcacttggaagatt
gataatttctctagattaaacaccaagaagcattattcagatgtttttgtagttggtggt
tataaatggcgaatactgatatttccaaagggtaacaatgtggatcatttgtccatgtat
ctggatgttgctgactcagcaagtttaccctatgggtggagtagatatgcgcagttcagc
ttggctgtagttaatcaaattcatagtaaatattcaatcagaaaagacacacaacaccag
tttaatgcaagagaaattgattggggttttacatcctttatgccccttggtgagctatat
gatccttgcagagggtatcttgtgaatgacactttggttgttgaagcagaggtcgttgtc
cgcaaaattgtggattactgggcatatgactcaaagaaggaaactggttatgttggactt
aagaatcaaggagcaacatgttacatgaactctctgctccaaaccctgtatcatattcct
tacttcaggaaggcagtttatcatatgcctacaactgaaaacgatatgccatctggaagt
atccctcttgctctgcagagtttattttacaaactccagtacagtgacagtagtgttgca
acaaaagagctgaccaaatcttttggatgggacacatatgattctttcatgcagcatgat
gttcaagaacttaatagagttctatgtgaaaaacttgaagataaaatgaagggtactgtt
gtggagggcaccatacaacagttgtttgaagggcatcatatgaactacattgagtgcatt
aatgtggattataaatctacaaggaaggaatcattttatgacctacagcttgatgttaaa
ggctgtcgagatgtatatgcttcttttgacaagtatgttgaagttgaacggcttgaaggt
gataataaatatcaggctgagcaatatggattgcaggatgctaagaagggtgtgttgttc
attgatttccctccagtccttcaaattcagcttaaacgttttgaatatgattttatgcga
gatactatggttaagattaatgaccgctatgagttccctttgcaacttgaccttgatcga
gatgatggaaaatacttatcaccagaagctgataggagtgttcggaatctttacacactt
cacagtgtccttgttcatagtggtggagtgcatggtggacattattatgcatatatcagg
ccgactctttctgatcagtggtataaatttgatgatgaaagagtaaccaaagaagatttg
aaaaaggcattagaggagcagtatggtggggaagagttaccgcagacaaacccagggttc
aataatactccttttaaatttaccaaatattcaaatgcatacatgctggtgtatatacgt
gaaagcgacaaagacaagataatatgtaatgtggatgagaaggatatcgcagaacatctt
agggagagattgaagaaagaacaagaagagaaagagcataaaaagaaagagaaggcagag
gcacacctttacactattataaaggttgctcgagatgatgatcttgcagagcagattggg
aaagatatatgttttgatcttgtggatcatgataaagtcaggagttttcatattcagaag
cagatgcctttcaatgtgtttaaggaagaggttgctagagagtttggcataccagtgcaa
tttcagcgattctggttgtgggccaagcgtcaaaaccatacctaccgtccaaaccgacca
ttgatacctttggaggaaacacaatctgttggagccttgaaggaggtatcaaataaggtt
cacaacgcagaactgaagttgttcctggaagttgagcttggactggatttacgcccaatt
gctccaccatataagacaaaggaagatattttacttttcttcaagcactatgatcctgag
aaagaagagcttcgctatgttggaaggctgttcgtgaaaagtgcaggcaagccaatagaa
attttgtccagattaaacaaaatggcagggtatgctcctgatgaagagatcaatctttac
gaggaaataaagtttgagcccagtgttatgtgtgaaccaattgacaagaaaatcacgttt
cgtgctagccagcttgaggatggtgacattgtttgctttcaaaagtctctccctgttgaa
agtactaatcagtaccgctatccagatgttccttcatttctggaatacgtgcataatcgc
caggttgtacactttcgttttctggaaaaacccaaggaagatgatttctgtctggagatg
tcaaggctttatacttatgatgatgttgttgaaagagtagctcagcaacttggtttggat
gatccaactaaaatcaggcttacatcacacaactgttactcccagcagcccaaacctcag
cctatgaagtatcgtggagtggatcatttgtctgacatgctgttccactacaatcagacg
tctgatattttatactttgaagtattagacatccctctgccagaactacaaggtttgaaa
acgctgaaggtagcatttcatcatgctacaaaagatgaagttgttatccatactattagg
cttccaaaacagagcactgttggtgatgtgattaatgatcttaagacaaaagtggagttg
tctcaccctgatgcagaattgagattgcttgaagttttctataacaagatctacaagatt
ttcccacccaatgagaagattgacaatataaatgaccaatactggacactacgagcagaa
gagataccagaggaagagaaaaatcttggtccaaatgatcgcctaattcatgtataccac
tttactaaggaaacagctcagaaccagatgcaaattctgaattttggagaaccctttttc
ttggtgattcatgaaggtgagactttggccgaaataaaagtccgtatacagaggaagctg
caagttcccgatgaggagtttgccaagtggaagtttgcattcctctcacttggtcggcca
gagtaccttcaagattctgatattgtatctagtcgttttcagagaagagatgtttacggt
gcttgggagcagtatcttgggttggagcactctgacaatattcctaaaagagcttgtgca
attaatcagaaccgacacacttttgagaagccagtaaaaatctacaattag
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integrated database retrieval system
