Gossypium hirsutum (upland cotton): 107959243
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Entry
107959243 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107959243 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107959243
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107959243
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
107959243
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107959243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
107959243
NCBI-ProteinID:
XP_016750736
UniProt:
A0A1U8PHP3
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Position
A05:7326112..7338866
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AA seq
1248 aa
AA seq
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MAVEANFASLFEKLKVEDPWLPPRTWESIPSQSGPLPPLPNSQPPISSSSSVSPTNYDIA
WEATLVRLALNALQGVESSLCSIEKLSAAFFSDPADRTFHQTPSLWYRSSSTHALGKILK
SIGRSGFLVFLLHKFEEYFTNLNLNGNSFSLRKGWENSQATDNQNHGGHKVQEEEGPKYS
LVNQAFSVAVGKVLEGYICALDTLYASVNVRHSKSTEVSTGVSSGCLTSVVYSGITLLEV
YLHTKELRTQIEALGNICNLHDLALCFLESSFEELSYKATMGFHKFFRGGDLLSYLYTQL
KVADPAHHALFKFLFLRSCEPYCEFIRSWIFKAEINDPYKEFVVEYIDTLQHRSAGKDGI
PIDFPVANITERDGVVVPCFLKDLLTPLIRAGQQLQVLMKLLELREHVDTGDHTYFDFLP
CWSGFAGSNPIYASSITFGKENIEALVLMRNSYYERMEEKLENLLTGLEFNCQQVFSHRA
EPHLFGTSGDTPNIVASLTVDDKLVINSTMKRSFSNVSLDNNDFDDSSTKDGSSHEADIF
EPFESSSMSSFEEHTESEQLIEHSNNLVWPKQNYFSALSFSVSTPFGNSLQLALQNGQSD
RMESSLQAGTGGHGNFIGCEPNGIYDHLSPHLESNWLCAEVESANILTSKGWPVNSARNN
AFCIDGDDRDDKRSHLCDSDIKMRKCNTQFFDKFVQHFNESIAINNTSAVDTSNEVQHEK
DSTSGLFQLQQFKLTYNGSLLSKNPMLTNNSFFRMMSKTGVASRIDHQQTLPYFDFSSVD
DPCMVYVKRLSSGFTHEFPENTSSVTNGRGNQDDKQGYGDVLLVDNSKSSYAVPPLELRN
QTQDVISTTVSGSSYWESLLGSFSNPNSSGTIDMKLNTSSTFEIPLDFVIDKCLLQEILL
QYNYVSKLTIKILEEGFDLQEHLLALRRYHFMELADWADLFIMSLSHHKWCVTEVDRRLS
EIQGLLELSVQRSSCERDPHKDRLFIYAKGHGLLPLSTSTIGVHSFDFLGLGYRVDWPIS
IILTPAALKIYADIFNFLIQLKLAVFSLTDVWCSLKDIVHLICQKRHPTLHEREVGHFNK
LMKLRHQVNHFVSTLQQYVQSQLSHVSWCKFLHSFKHKVKDMMDLESVHMSYLTDSLHIC
FLSDETKPIASTIENILQCALDFRSCLTGDIWNVGLAEGDLQDKLSKINISQVLGIKETF
DKNLKELHLLYLKSPKHGESGLSCFWGYLNYNDYYFNENEMSYYAFSI
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaggcgaatttcgcatcgttgtttgagaagctgaaagtggaagatccatgg
ctccctcctcgaacctgggaatccattccttctcaaagcggcccccttcctcctcttcca
aactctcaacctcccatttcctcctcttcatcagtctcccctacgaactacgacattgcc
tgggaggcaactttggtgaggttggcactaaatgcactgcaaggcgtagaatcatctctt
tgtagcatagaaaaactttctgctgcctttttttccgatcctgcggataggactttccat
caaacacctagtctttggtaccggtcttcaagcactcatgctttggggaagattctcaaa
tcaataggccgttcaggtttcttagttttccttctccataagtttgaagaatattttaca
aatttgaatctcaatggaaattcattttcactacggaagggctgggaaaattctcaagca
acagacaatcaaaatcatggtggccacaaagtgcaagaggaagagggccctaaatatagc
cttgttaatcaagcattctctgtagctgtaggaaaggttttggaagggtacatttgtgcg
ttggacacattatatgcatcagtaaatgtaaggcattcaaagagtactgaagtctctaca
ggtgtatcttcaggctgtctcacaagtgtggtttactctggaattacgctattggaggta
tacctgcacacaaaggaattgaggacccagattgaagctcttgggaatatatgcaatctt
catgatttagctctttgcttcttggaatcttcttttgaagaactaagttataaggcaacc
atgggatttcataaattctttaggggaggtgacctgcttagttacttgtatacacagcta
aaggttgcggaccctgctcaccatgctttattcaagtttctttttcttcggtcatgtgaa
ccttattgtgagtttataaggtcctggatttttaaagctgagattaatgatccttataag
gagtttgttgtagagtacattgatacattacaacatcgttctgctggtaaagatggaatc
cctattgactttccggttgcaaatattacggagcgggatggagttgttgttccatgtttc
ctgaaggatcttttgactccacttattagggctggtcagcagcttcaagttctaatgaaa
ttgcttgaattgcgtgaacatgttgatactggagaccatacttattttgattttcttccc
tgctggagtggttttgctggcagtaatccgatttatgcttcttcaatcacttttggcaaa
gaaaatatagaagccttggttctcatgcgtaatagttactatgagaggatggaggagaaa
cttgaaaatttactgacagggttggaattcaattgtcaacaggtattttcgcatagggct
gaacctcatttatttggtactagtggagacactccaaatattgtagcttcactcacagtg
gacgacaaattggttattaattcaacaatgaaacgaagtttctctaatgtgtcgcttgac
aataatgattttgatgactctagtacaaaagatggatcctctcatgaagctgacatcttt
gaaccatttgagtcttcatctatgagtagttttgaagaacatactgagtctgagcagttg
attgaacactctaataatttagtttggcctaaacaaaattatttctctgccctaagcttt
tctgttagtaccccatttggaaactcattgcagctagctttgcagaatggacagtctgac
cgtatggaaagcagtttgcaggctggaactggtgggcatggcaattttataggttgtgaa
cctaatgggatatatgatcacttgtctccgcaccttgagtcaaactggttgtgtgcagag
gttgaatctgcaaatattctcacttccaaaggttggccagttaacagtgcaaggaataat
gccttctgtattgatggtgatgacagagatgacaaaagatcacatctatgtgattctgac
ataaagatgagaaaatgtaacacgcaattctttgataaatttgtgcaacattttaatgaa
tcaattgctatcaacaatacttcagcagtggacacgtcaaatgaggttcaacatgaaaag
gactctacttcagggttattccaattgcaacagttcaagcttacttacaatggtagcctt
ctgagcaaaaatccaatgttgacaaacaatagttttttccgtatgatgagcaaaactggt
gttgcaagccggatagaccaccaacaaactttaccttattttgatttttcttcagttgat
gacccttgtatggtttatgtcaaaaggctatcatctgggtttacacatgaatttcctgag
aataccagttctgtgacaaatggtaggggtaatcaggatgacaaacaaggttatggagat
gttctcttggttgacaattcaaaaagttcttatgctgttccacctttggagttaaggaat
caaacccaggatgtcatttcaacgactgtttctggcagcagctattgggagagtttgctt
ggtagttttagcaaccctaatagcagtgggactatagatatgaagctgaatacatcttcc
acatttgagataccccttgacttcgtaattgacaaatgcctgctgcaggaaatcttgctt
caatataactatgtcagcaaattaaccatcaagatacttgaagaaggttttgatttgcaa
gaacatttgttagcgctgcggcgatatcattttatggaattggcagactgggcagatttg
ttcatcatgtccctttcgcatcataaatggtgtgttacagaggtggaccggagactctct
gaaattcaaggacttcttgagttgtccgtgcagaggtcatcttgtgaaagagaccctcat
aaagataggttatttatttatgcaaaagggcatgggttgttgcctctttcaacttctaca
attggtgttcattccttcgactttttaggtctgggctatcgagtggattggcctatcagc
attattttgactcctgctgcattgaaaatatatgctgatatattcaactttctgatacaa
ctgaagcttgctgttttttcactgactgatgtatggtgctcattaaaggatatagtgcac
ttgatctgtcaaaaacgccatcctacactacatgaacgtgaagtgggccattttaacaag
ttaatgaagttgaggcatcaggttaatcattttgtatctacactacagcaatatgtacag
tcacaactatcacatgtatcatggtgcaagtttcttcactcatttaagcacaaggtcaaa
gatatgatggatcttgagtcagtgcatatgtcatatctaactgattcactacatatatgt
tttctatctgatgaaacaaaaccaatagccagtaccatagagaatattttgcagtgtgcc
ctagacttccggtcttgtcttactggggatatatggaatgtgggacttgctgaaggtgat
ttacaggataaactttctaagatcaacatatctcaggttcttggcataaaagaaacgttc
gacaaaaatcttaaagaactgcatctactctacctcaaatcacctaaacatggagaatct
gggctttcgtgtttctggggatatctcaactataatgactattactttaatgaaaatgaa
atgagctattatgctttctcaatctga
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