KEGG   Gossypium hirsutum (upland cotton): 107959274
Entry
107959274         CDS       T04793                                 
Name
(RefSeq) RNA-binding protein Y14-like
  KO
K12876  RNA-binding protein 8A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
ghi03015  mRNA surveillance pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107959274
  09122 Translation
   03013 Nucleocytoplasmic transport
    107959274
   03015 mRNA surveillance pathway
    107959274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107959274
   03041 Spliceosome [BR:ghi03041]
    107959274
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107959274
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   EJC/TREX
    107959274
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 107959274
NCBI-ProteinID: XP_016750769
UniProt: A0A1U8PKN5
LinkDB
Position
A05:complement(7059029..7062102)
AA seq 199 aa
MASGDVEAVDFEPEDDDLMDEDAAGDASPQAPLPKLKSAITGAASTSLSAHKKTKGRGFR
EDDADRHSRLASRDFESLGTDGGPGPQRSIEGWIILVSGVHEEAQEDDLHNAFGEFGEIK
NLHLNLDRRTGFVKGYALIEYEKFEEAKNAISTMDGTELLTQTINVNWAFSNGPSTGAFK
RKNLRSGRSHRSRSPRRRY
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcgagcggtgacgtggaggccgtggattttgaaccggaggacgatgacctcatggac
gaggacgccgccggcgatgcctcccctcaagctcccttgcctaagctcaagtccgccatc
actggcgccgcttccacctctctttctgctcataagaagaccaagggtcgtggcttccgt
gaggacgatgctgaccgccactcccgtctcgcctcccgcgacttcgagtccctcggcact
gacggcggccccggtccccagagatctattgaaggatggattattttggtcagtggtgta
catgaggaagcacaagaggatgatttgcacaatgcatttggtgaatttggtgagatcaag
aatttgcatttaaatcttgatcgtcgcactggatttgtcaagggatatgcattgattgag
tatgaaaagtttgaagaagcgaagaatgccatatccacgatggatggaacagaacttctt
acgcagactatcaatgtcaattgggcctttagcaatgggcccagtactggagccttcaaa
agaaaaaatttacgatctgggcgatcacatcgctcgaggagtcccaggagaagatactaa

DBGET integrated database retrieval system