Gossypium hirsutum (upland cotton): 107959309
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Entry
107959309 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107959309
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107959309
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107959309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf_RING_Vps8
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
107959309
NCBI-ProteinID:
XP_016750822
UniProt:
A0A1U8PHZ5
A0ABM3BPJ4
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All DBs
Position
D05:5742662..5749875
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AA seq
250 aa
AA seq
DB search
MSWDPHMEVQYINSNYPYNSAGSFIEYFEGLTYQHVNFIFDGASHVQESVYPSMTSSFYK
FGPSDSGSISYYDHRNDHSYEVNNHDLCIDEYRRASENSLSGSNEQTAAMNVEWERNAHA
TSLENSVDCPRRQHNAHDYQVIWQDCVDPDNMTYEELLELGESVGTQSRGLTQELISLLP
VSKYKCSLFSRKKSRKERCVICQMEYKRGERQITLPCKHVYHAGCGTRWLSINKACPICY
TEVFGNGSKH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagttgggatccacatatggaggttcaatacatcaacagtaactacccttataatagt
gctggcagctttatcgaatattttgaaggtcttacttatcaacatgtcaattttattttc
gacggtgcttctcatgtccaggagagtgtgtatccatccatgacttcaagcttttacaag
tttggcccatctgattctggcagtatttcatattatgatcatcgtaatgatcatagttat
gaggtgaataaccatgacctgtgcattgatgaatatagaagggcatcagagaattccttg
tcagggagtaatgaacagactgcagcaatgaatgtggaatgggaaagaaacgcacatgca
acttcgcttgaaaactcggtagattgtccacggagacaacataatgctcatgattaccag
gttatttggcaagattgtgttgatcctgacaacatgacatatgaggaattacttgagtta
ggggagagtgttggaacacaaagtcggggtctcacccaagaacttatttcattgctacct
gtttcaaaatacaagtgcagcttattctcaaggaagaaatcaaggaaagagagatgtgta
atttgccagatggaatataaaagaggtgagagacagattaccctaccttgcaagcatgtc
taccatgctgggtgtggcaccagatggcttagcatcaacaaggcttgccctatatgttat
acggaggtgtttggcaatggatcaaaacattaa
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