Gossypium hirsutum (upland cotton): 107959404
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Entry
107959404 CDS
T04793
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 12 homolog A
KO
K03035
26S proteasome regulatory subunit N5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107959404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107959404
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
107959404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
ARM_TT21
DUF4376
DUF6104
LAMB4
LMSTEN
Motif
Other DBs
NCBI-GeneID:
107959404
NCBI-ProteinID:
XP_016750951
UniProt:
A0A1U8PIC6
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Position
D04:complement(3828476..3834708)
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AA seq
443 aa
AA seq
DB search
MEVKNGNLEAAIDQLLNVEKQMRFAGDVAGTKKAVTDILLLCFEAKDWKSLNEQIVNLSK
KRGQLKQAVTAMVQQAMQYIDETPDLETRIELIKTLNSVSAGKIYVEIERARLIKKLAKI
KEEQGLIAEAADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPR
VFDIDSSKEKKKPKEGDNVVEEPPADIPSLLELKRIYYELMIRYYFHNNDYLEICRCYKA
IYEIPSIRENPSQWIPVLRKICWYLILAPHDPMQSSLLNSTLEDKNLSEIPKFRLLLKQL
VTMEVIQWTSLWNSYEDEFENEKNMLGGSLGDKAAEDLKQRIIEHNILVVSRYYSRITLK
RLAELLCLTVEEAEKHLSEMVVSKALVAKIDRPMGIVCFQVAKDSNEILNSWAVNLEKLL
DLVEKSCHQIHKETMVHKAALKV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaaaaacggaaatttggaggcggcgatcgaccagttgcttaatgttgagaag
cagatgcgcttcgccggcgatgtcgctggaaccaagaaagcggttactgacattttgctg
ctttgctttgaagctaaagattggaagtctctcaacgaacaaatcgttaatttgtccaag
aaacgaggtcaacttaagcaggcagtaactgcaatggttcaacaagcaatgcagtacatt
gatgaaacaccagatctcgaaactcgtatagagctaatcaagaccctgaacagtgtgtct
gctggaaaaatttatgttgaaattgagagagcaagattgatcaagaaacttgcaaagatt
aaagaagaacagggccttattgctgaagctgcagatttaatgcaagaagttgctgtggaa
acttttggtgccatggccaaaactgagaaaatcgccttcatccttgaacaagttcgcctc
tgcttagatcgtcaggattatgttcgtgctcaaattctttcaaggaagattagccctaga
gtttttgatattgacagctcaaaggaaaagaagaaaccgaaagaaggtgacaatgttgta
gaggagcctccagctgatataccttcactattggaattgaagcgtatctactatgaactg
atgatacggtattacttccataacaatgactatcttgaaatttgtcgttgctataaggca
atatacgagattccttccatcagggaaaacccgtctcaatggataccggtcttgagaaaa
atctgttggtacttaatcctggctccacatgatccaatgcagtcaagccttcttaattcc
acattggaggataagaatctttctgagattccaaaatttaggttgctgttgaaacagttg
gttacaatggaggtcatccagtggacatccctttggaattcttatgaggatgaatttgag
aatgagaagaacatgcttggaggttctttgggtgacaaagctgcagaagatttgaaacag
cgaattattgagcataatatccttgttgtttcaaggtactactcaaggattacattgaag
agactggcagagttgttgtgtctcactgtcgaggaagctgagaagcatctatctgaaatg
gttgtgtcaaaggcactggtagcgaagattgaccggccaatgggaatagtgtgcttccag
gtagcaaaggatagcaatgaaattctcaactcatgggctgtgaacttggaaaaacttctt
gatcttgttgagaagagttgccaccaaatacacaaagaaaccatggttcacaaagctgct
ctgaaagtgtga
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