Gossypium hirsutum (upland cotton): 107959428
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Entry
107959428 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107959428
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107959428
NCBI-ProteinID:
XP_016750982
UniProt:
A0A1U8PIF2
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Position
D04:complement(4158867..4161323)
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AA seq
580 aa
AA seq
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MATNGCEGRLKMIAELTTNAEQIQDEVLGEILSRNAGTEYLRGYLHGQTEKQLFKKNVPI
VTYEDLKPYIDRIANGETSDILLAEPITGFFLSSGTSGGQPKLMPVTAEVANKWELFRGL
YESPAMKHFGDINQAGKRLELMFARPEIETPSGLKAASVSTSIYNECNFRANLPKLYTSP
VETIFCPDPNQGLYCQLLFGLIQRDEVVKVGSVFASTVLRGIKFLENHWQELCYDIKTGR
LSDWITDSGCRNAASLVMKPNPEQADLIETICNCKSWEGIIRKLWPKARYICCICTGIMR
QYTTELEFYCRGLPLVSDLYACSEAICGMNLEPLCKPCDISYTFLPNMAYFEFLPVKNEG
DGSIEMKSNNEDTELVDLVNVKAGQCYELVVTTCAGLYRYKVGDVLMVSGFYNNAPQFQF
VERKNVILSVDQEKTSETDLFKAVTEAKALLDPLGFILTEYTSYVDTSSAPGHYVLFWEI
KGKEGTHCKELDPKIMVECCSRMEESLHYTYKIYRKRNIIAALEIRVVKQGSFEALMDYY
VSKGTSLSQYKKPSCIKSEEAMKILDSRVIGKYFSPKSPL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaatgggtgtgaaggtaggttgaagatgattgcggaactgaccacaaatgct
gagcaaattcaagacgaggtattgggggaaatactaagtcgaaatgcaggaacagagtat
ttaaggggatacctccatggtcaaaccgagaagcagctctttaagaaaaatgttcccata
gttacttatgaagatctcaagccttacatagataggattgctaatggggagacatcagat
atccttttagctgaacccattacagggttctttttaagctctgggacttcaggcgggcag
ccaaagctgatgcctgtcactgctgaagttgctaataagtgggaattatttcgtggcttg
tacgagtctcctgcgatgaagcactttggtgacatcaaccaagccggtaaaagactggag
cttatgtttgccagaccagagattgaaactcctagtggcctcaaggcagcatctgtttca
acgagcatatacaacgagtgtaattttagagccaatttgcctaagctttacacaagcccc
gttgagaccatcttttgcccagaccccaaccagggcttatactgtcaattactttttggt
ttaatccaacgagacgaagttgtcaaggttggttcagtctttgcatctacggtgctaaga
ggtatcaagtttctagaaaatcactggcaagagctatgctatgacataaaaacaggtcga
ttaagcgattggatcaccgactcaggatgcagaaatgcagcatcattggtcatgaagcct
aatccagaacaggctgacttgatagaaactatatgtaattgtaaatcatgggaaggaata
atcagaaagttatggcctaaagcaaggtatatttgctgcatttgtactggcattatgaga
cagtatactacagaactcgagttctattgcagagggctccctttagtttcagatttatat
gcttgctcggaagctatttgtgggatgaacttagaacctctatgcaaaccttgtgatatc
tcctacacatttctccctaacatggcttacttcgaattccttccagtaaagaatgaaggt
gatggatctattgaaatgaagagcaacaatgaagatactgaacttgttgatcttgtaaat
gtgaaggctggtcagtgttatgaactagttgtcacaacttgtgcaggattatatcgatat
aaagttggagatgttcttatggtgagtggtttctacaataatgcacctcaattccaattt
gtggagaggaaaaatgttatcctaagtgttgatcaggaaaaaacaagcgaaacagacctt
ttcaaggctgtgacagaagcaaaggctcttctcgatccactcggattcatcttgacagag
tacactagctacgttgatacttcttctgcaccaggtcactatgtattattttgggagatc
aagggaaaagaaggcacgcattgcaaagaacttgacccaaagataatggtagagtgttgc
tctagaatggaagagtcattgcattatacatataaaatctataggaaaaggaacataatt
gcagctttggagattagggtggtaaagcaaggaagttttgaggcactaatggattactat
gtgtccaaaggaacttcattgagccaatacaaaaaacctagttgcattaaatctgaggaa
gccatgaagatattagattcaagagtgataggaaagtatttcagccccaaatcaccgtta
taa
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