Gossypium hirsutum (upland cotton): 107959431
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Entry
107959431 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107959431
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107959431
NCBI-ProteinID:
XP_040947659
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Position
D04:complement(4133670..4149579)
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AA seq
580 aa
AA seq
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MATNGCEGRLKMIEELTTNAEQIQDEVLGEILSRNAGTEYLRGYLHGQTEKQLFKKNVPI
VTYEDLKPYINRIANGETSDILLAEPITGFFLSSGTSGGQPKLMPVTAEVANKWELFRGL
YESPAIKHFGDINQAGKRLELMFGRPEIETPSGLKAASVSTSIYNECNFRTILSKLYTSP
IETIFCPDPNQGLYCQLLFGLIQRDEVVKVGSVFASTVLRGIKFVENHWQELCYDIKTGQ
LSDWITDSGCRNAASLVMKPNPEQADLIETICNCKSWEGIIRKLWPKARYIGCICTGIMR
QYTTELEFYSRGLPLVSDLYACSEAICGINLEPLRKPCDVSYTFLPNMAYFEFLPVKNEG
DGSIEMKSNNEDTELVDLVNVKAGQCYELVVTTCAGLYRYKVGDVLMVSGFYNNAPQFQF
VERKNVILSVDQEKTSETDLFKAVTEAKALLDPLGFILTEYTSYVDTSSAPGHYVLFWEI
KGKEGKHCKELDPKIMVECCSRMEESLHYTYKIYRKRNIIAALEIRVVKQGSFEALMDYF
VSKGTSLSQYKKPSCIKSEEALKILDSRVIGKYFSPKPPL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaatgggtgtgaaggtaggttgaagatgattgaggaactgaccacaaatgct
gagcaaattcaagacgaggtattgggggaaatactaagtcgaaatgcaggaacagagtat
ttaaggggatacctccatggtcaaaccgagaagcagctctttaagaaaaatgttcccata
gttacttatgaagatctcaagccttacataaataggattgctaatggggagacatcagat
atccttttagctgaacccattacagggttctttctaagctctgggacttcaggcgggcag
ccaaagctgatgcctgtcactgctgaagttgctaataagtgggaattatttcgtggcttg
tacgagtctcctgcgataaagcactttggtgacatcaaccaagccggtaaaagactggag
cttatgtttggcagaccagagattgaaactcctagtggcctcaaggcagcatctgtttca
acgagcatatacaacgagtgtaattttagaaccattttgtctaagctttacacaagcccc
attgagaccatcttttgcccagaccccaaccagggcttatactgtcaattactttttggt
ttaatccaacgagacgaggttgtcaaggttggttcagtctttgcatctacagtgttaaga
ggtatcaagtttgtagaaaatcactggcaagagctatgctatgacataaaaacaggtcaa
ttaagcgattggatcaccgactcaggatgcagaaatgcagcatcattggtcatgaagcct
aatccagaacaggctgacttgatagaaactatatgtaattgtaaatcatgggaaggaata
atcagaaagttatggcctaaagcaaggtatattggttgtatttgtactggcattatgaga
cagtatactacagaactcgagttctattccagagggctccctttagtttcagatttatat
gcttgctcggaagctatttgtgggattaacttagaacctctacgcaaaccttgtgatgtc
tcctacacatttctccctaacatggcttacttcgaattccttccagtaaagaatgaaggt
gatggatctattgaaatgaagagcaacaatgaagatactgaacttgttgatcttgtaaat
gtgaaggctggtcagtgttatgaactagttgtcacaacctgtgcaggattatatcgatat
aaagttggagatgttcttatggtgagtggtttctacaataatgcacctcaattccaattt
gtggagaggaaaaatgttattctaagtgttgatcaggaaaaaacaagcgaaacagacctt
ttcaaggctgtgacagaagcaaaggctcttctcgatccactgggattcatcttgacagag
tacactagctacgttgatacttcttcagcaccaggtcactatgtcttattttgggagatc
aagggaaaagaaggcaagcattgcaaagaacttgacccaaagataatggtagagtgttgc
tctagaatggaagagtcattgcattatacatataaaatctataggaaaaggaacataatt
gcagctctggagattagggtggtaaagcaaggaagttttgaggcactaatggattatttt
gtgtccaaaggaacttcattgagccaatacaaaaaacctagttgtattaaatctgaggaa
gccttgaagatactagattcgagagtgataggaaagtatttcagccccaaaccaccgtta
taa
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