KEGG   Gossypium hirsutum (upland cotton): 107959473
Entry
107959473         CDS       T04793                                 
Name
(RefSeq) WD repeat-containing protein 55
  KO
K24750  WD repeat-containing protein 55
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ghi04990]
    107959473
Domain-containing proteins not elsewhere classified [BR:ghi04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   107959473
SSDB
Motif
Pfam: WDR55 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_WDR11_1st BBS2_Mid Beta-prop_DCAF4 Beta-prop_EIPR1 Ribosomal_L3 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 107959473
NCBI-ProteinID: XP_016751026
UniProt: A0A1U8PIJ2
LinkDB
Position
D04:4797388..4804068
AA seq 353 aa
MEASLGEIPFGIDFHPSKELVAVSLITGDLHLYKYNTDNSSLQRCLDLHAHAESCRTVRF
INGGQAVATGSKDCSILATDVETGSVIARLENAHENAINSLINLTESTVATGDDEGCIKV
WDTRQRSCSGSINAHEDYISDMNFVSDSMKLLTTSGDGTLSVCNLRTYKVQTRSEFSEDE
LSSVVVMKNGRKVICGSQGGTLLLYSWGFFKDCSDRFVDLSPNSVEAMLKLDEDRLITGS
ENGLISLVGILPNRIIQPIAEHSEYPVEGLAFSHDRRFLGSISHDQMLKLWDLNEILQGS
ENAAKGQDASSDSDSDGMDVDDNPSHSKKGTKTKNANKGGAGFSGSNNFFADL
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggaggccagtttaggggaaattccctttggcatcgactttcatccttcaaaagaactt
gtcgctgtttctctcatcaccggagatcttcatctatacaaatataatacagataattcc
tcgctacaaagatgcttggacttacatgctcatgctgagtcctgtagaacagttcggttt
atcaatggcggacaagctgtggctacgggttcaaaagattgttctattctagccacggat
gttgaaaccggatcagtaattgctcgtcttgaaaatgctcatgagaatgccatcaatagt
ttaatcaatcttacagaatcaactgttgccactggagacgatgaaggctgtattaaggta
tgggatacccgacaacgatcatgctctggctccattaatgctcatgaagactacatttca
gatatgaattttgtatctgattccatgaaattgctaacaacaagtggagatgggactcta
tctgtttgcaatcttcgaacttacaaagttcagacacgctctgaattctctgaagacgaa
cttagttctgttgttgttatgaagaatggtcggaaagttatttgtggatcacaaggtgga
actttgctgttatattcgtggggattttttaaggactgcagtgatcgttttgttgatctt
tctccaaattctgtggaggctatgttgaagcttgatgaagatagactcattacaggatct
gagaatggactcatcagcctagtaggcatattacctaacagaatcatacaaccaattgca
gagcattcagaatatccagttgagggccttgctttttctcatgatagaagatttcttggc
agtatatcacatgatcagatgttgaagctgtgggatctcaatgagatattgcaaggttcc
gaaaatgctgcaaaaggtcaagatgccagttcagacagtgatagtgatgggatggacgtg
gatgataatccttctcattctaagaaagggaccaaaacaaaaaatgcaaataaaggagga
gctgggtttagcggttcaaacaactttttcgcagatctttaa

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