Gossypium hirsutum (upland cotton): 107959523
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Entry
107959523 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107959523
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107959523
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107959523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
TMEM43
Motif
Other DBs
NCBI-GeneID:
107959523
NCBI-ProteinID:
XP_016751087
UniProt:
A0A1U8PIR4
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All DBs
Position
A05:complement(27589102..27592356)
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AA seq
185 aa
AA seq
DB search
MEGPPPNDCCSICHGYFNVPCQANCSHWFCGNCIMLVWQHGSPFQTCKCPLCRRQITLLV
PGEASLRERHNPAVAEVLEKVEKYNRYFGGQSNGLIQRLQDLPFLLRRLLREITDPQRTL
PLVIRARIYLAMFLSAIYIFSPIDIIPEAILGVVGLLDDLLIALVGFLHVATIYRSVLYS
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcctccgcccaatgactgctgctctatttgccatggatactttaacgttcct
tgccaagccaattgttctcattggttctgcggtaactgtattatgcttgtttggcaacat
ggatccccatttcaaacttgtaaatgccctctgtgtcggcgtcagattactttgttagtt
cctggtgaggcctcattaagggagcgtcataatccagcagttgcggaggttctggaaaag
gttgaaaaatacaaccgttactttggtggacaatccaatggtctcattcagagactgcaa
gaccttccttttctgcttcgcagattgttacgagaaataacagatcctcaaagaactctt
cctcttgttatcagagctcgtatatatcttgcaatgttcttaagtgccatctacatattc
agccccatagacattattcctgaagctatcttgggggtagtcggccttttggatgatctt
cttatagcactcgtcggttttctccatgttgccaccatctatcggtctgttctatactct
cgtcatggaggttcttga
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